Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : JQG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 63


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C02 C C1 N N N 0 -6.726 -0.433 0.617
2 C04 C C2 N N N 0 -4.352 0.115 0.657
3 C05 C C3 N N N 0 -3.223 0.364 -0.346
4 C07 C C4 N N N 0 -0.85 0.912 -0.305
5 C08 C C5 N N N 0 0.426 1.215 0.438
6 C09 C C6 N N N 0 1.554 1.463 -0.565
7 C11 C C7 N N N 0 3.928 2.011 -0.524
8 C12 C C8 R N N 0 5.176 2.423 0.214
9 C14 C C9 N N N 0 5.777 1.206 0.918
10 C15 C C10 N N N 0 4.8 0.697 1.981
11 C16 C C11 N N N 0 6.037 0.1 -0.107
12 C22 C C12 N N N 0 7.095 1.602 1.586
13 C25 C C13 S N N 0 -8.025 -0.618 -0.124
14 C26 C C14 N N N 0 -8.584 0.749 -0.524
15 C27 C C15 N N N 0 -9.825 0.557 -1.397
16 C28 C C16 N N N 0 -8.962 1.533 0.734
17 C30 C C17 N N N 0 -9.993 -2.018 0.2
18 N03 N N1 N N N 0 -5.591 -0.179 -0.066
19 N06 N N2 N N N 0 -1.984 0.658 0.377
20 N10 N N3 N N N 0 2.794 1.758 0.158
21 N29 N N4 N N N 0 -8.987 -1.304 0.743
22 O01 O O1 N N N 0 -6.701 -0.507 1.827
23 O13 O O2 N N N 0 6.124 2.954 -0.714
24 O17 O O3 N N N 0 6.598 -1.038 0.551
25 O19 O O4 N N N 0 5.772 -3.148 -0.561
26 O21 O O5 N N N 0 7.724 -2.05 -1.469
27 O23 O O6 N N N 0 3.945 1.908 -1.732
28 O24 O O7 N N N 0 -0.855 0.896 -1.518
29 O31 O O8 N N N 0 -10.102 -2.093 -1.006
30 P18 P P1 N N N 0 6.998 -2.39 -0.225
31 H051 H H4 N N N 0 -3.483 1.21 -0.982
32 H041 H H1 N N N 0 -4.093 -0.731 1.293
33 H042 H H2 N N N 0 -4.493 1.003 1.273
34 H052 H H3 N N N 0 -3.083 -0.525 -0.962
35 H081 H H5 N N N 0 0.285 2.103 1.054
36 H082 H H6 N N N 0 0.685 0.368 1.075
37 H092 H H7 N N N 0 1.695 0.575 -1.181
38 H091 H H8 N N N 0 1.295 2.309 -1.201
39 H121 H H9 N N N 0 4.926 3.184 0.953
40 H153 H H10 N N N 0 3.894 0.334 1.497
41 H152 H H11 N N N 0 5.263 -0.116 2.54
42 H151 H H12 N N N 0 4.549 1.51 2.662
43 H251 H H18 N N N 0 -7.852 -1.216 -1.019
44 H162 H H13 N N N 0 5.097 -0.183 -0.582
45 H161 H H14 N N N 0 6.732 0.462 -0.864
46 H223 H H15 N N N 0 6.902 2.343 2.361
47 H222 H H16 N N N 0 7.556 0.721 2.032
48 H221 H H17 N N N 0 7.768 2.025 0.839
49 H261 H H19 N N N 0 -7.828 1.301 -1.082
50 H273 H H20 N N N 0 -10.628 0.126 -0.799
51 H272 H H21 N N N 0 -10.144 1.521 -1.793
52 H271 H H22 N N N 0 -9.588 -0.114 -2.223
53 H283 H H23 N N N 0 -8.078 1.67 1.357
54 H282 H H24 N N N 0 -9.36 2.507 0.449
55 H281 H H25 N N N 0 -9.718 0.981 1.293
56 H301 H H26 N N N 0 -10.702 -2.524 0.838
57 H031 H H27 N N N 0 -5.596 -0.192 -1.036
58 H061 H H28 N N N 0 -1.979 0.671 1.347
59 H101 H H29 N N N 0 2.798 1.77 1.128
60 H291 H H30 N N N 0 -8.9 -1.245 1.707
61 H131 H H31 N N N 0 6.393 2.33 -1.402
62 O1 O O9 N N Y 0 7.943 -3.29 0.718
63 H1 H H32 N N N 0 8.224 -4.123 0.314