Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : K03

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 52


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O12 O O12 N N N 0 -2.071 1.202 0.668
2 C11 C C11 N N N 0 -1.65 0.287 -0.037
3 C13 C C13 N N N 0 -2.57 -0.537 -0.839
4 S17 S S17 N N N 0 -1.908 -1.802 -1.744
5 C16 C C16 N N N 0 -3.465 -2.221 -2.322
6 C15 C C15 N N N 0 -4.443 -1.394 -1.816
7 C14 C C14 N N N 0 -3.908 -0.403 -0.942
8 N10 N N10 N N N 0 -0.27 -0.07 -0.106
9 C9 C C9 N N N 0 0.801 0.48 0.544
10 S18 S S18 N N N 0 0.47 1.788 1.597
11 C19 C C19 N N N 0 2.116 1.945 2.004
12 C26 C C26 N N N 0 2.915 1.019 1.361
13 C25 C C25 N N N 0 4.403 0.972 1.547
14 C22 C C22 N N N 0 4.878 1.747 2.809
15 C24 C C24 N N N 0 4.652 0.898 4.076
16 C23 C C23 N N N 0 6.388 2.024 2.683
17 C21 C C21 N N N 0 4.126 3.105 2.916
18 C20 C C20 N N N 0 2.596 2.962 2.987
19 C8 C C8 N N N 0 2.144 0.171 0.51
20 C6 C C6 N N N 0 2.67 -0.893 -0.31
21 O7 O O7 N N N 0 3.005 -0.608 -1.473
22 N3 N N3 N N N 0 2.769 -2.196 0.225
23 C4 C C4 N N N 0 3.276 -3.318 -0.553
24 C5 C C5 N N N 0 4.752 -3.454 -0.401
25 C2 C C2 N N N 0 2.369 -2.507 1.596
26 C1 C C1 N N N 0 0.932 -2.9 1.661
27 H10 H H10 N N N 0 -0.048 -0.862 -0.74
28 H14 H H14 N N N 0 -4.501 0.348 -0.436
29 H16 H H16 N N N 0 -3.589 -3.051 -3.003
30 H15 H H15 N N N 0 -5.493 -1.495 -2.061
31 H201 H 1H20 N N N 0 2.132 3.938 2.802
32 H202 H 2H20 N N N 0 2.306 2.647 3.997
33 H251 H 1H25 N N N 0 4.742 -0.071 1.595
34 H252 H 2H25 N N N 0 4.861 1.416 0.652
35 H241 H 1H24 N N N 0 5.216 1.308 4.919
36 H242 H 2H24 N N N 0 3.592 0.883 4.345
37 H243 H 3H24 N N N 0 4.98 -0.133 3.911
38 H231 H 1H23 N N N 0 6.564 3.055 2.362
39 H232 H 2H23 N N N 0 6.888 1.873 3.645
40 H233 H 3H23 N N N 0 6.842 1.352 1.949
41 H211 H 1H21 N N N 0 4.379 3.716 2.038
42 H212 H 2H21 N N N 0 4.475 3.665 3.791
43 H4C1 H 1H4C N N N 0 2.769 -4.223 -0.204
44 H4C2 H 2H4C N N N 0 3.007 -3.145 -1.6
45 H2C1 H 1H2C N N N 0 3.005 -3.322 1.953
46 H2C2 H 2H2C N N N 0 2.557 -1.62 2.207
47 H5C1 H 1H5C N N N 0 5.267 -2.558 -0.765
48 H5C2 H 2H5C N N N 0 5.023 -3.625 0.646
49 H5C3 H 3H5C N N N 0 5.109 -4.309 -0.987
50 H1C1 H 1H1C N N N 0 0.287 -2.081 1.322
51 H1C2 H 2H1C N N N 0 0.742 -3.787 1.049
52 H1C3 H 3H1C N N N 0 0.658 -3.137 2.696