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PDBeChem : Atoms of Molecule
Molecule : KDJ
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 60
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
N15 |
N |
N1 |
N |
N |
N |
0 |
-1.663 |
0.973 |
0.279 |
2 |
C3 |
C |
C1 |
R |
N |
N |
0 |
1.996 |
0.799 |
-0.694 |
3 |
C4 |
C |
C2 |
S |
N |
N |
0 |
0.74 |
1.33 |
0.001 |
4 |
C5 |
C |
C3 |
N |
N |
N |
0 |
-0.461 |
0.465 |
-0.386 |
5 |
C6 |
C |
C4 |
R |
N |
N |
0 |
-0.209 |
-0.98 |
0.05 |
6 |
C1 |
C |
C5 |
S |
N |
N |
0 |
1.046 |
-1.511 |
-0.645 |
7 |
C2 |
C |
C6 |
N |
N |
N |
0 |
2.247 |
-0.646 |
-0.258 |
8 |
O75 |
O |
O1 |
N |
N |
N |
0 |
-5.495 |
1.405 |
-2.005 |
9 |
PB5 |
P |
P1 |
N |
N |
N |
0 |
-5.59 |
0.776 |
-0.526 |
10 |
O85 |
O |
O2 |
N |
N |
N |
0 |
-6.805 |
1.285 |
0.149 |
11 |
O95 |
O |
O3 |
N |
N |
N |
0 |
-5.665 |
-0.829 |
-0.629 |
12 |
C45 |
C |
C7 |
N |
N |
N |
0 |
-4.116 |
1.255 |
0.434 |
13 |
F55 |
F |
F1 |
N |
N |
N |
0 |
-4.05 |
2.65 |
0.523 |
14 |
F65 |
F |
F2 |
N |
N |
N |
0 |
-4.198 |
0.709 |
1.719 |
15 |
C25 |
C |
C8 |
N |
N |
N |
0 |
-2.878 |
0.738 |
-0.254 |
16 |
O35 |
O |
O4 |
N |
N |
N |
0 |
-2.977 |
0.109 |
-1.286 |
17 |
O14 |
O |
O5 |
N |
N |
N |
0 |
0.506 |
2.68 |
-0.406 |
18 |
PA4 |
P |
P2 |
N |
N |
N |
0 |
0.467 |
3.913 |
0.628 |
19 |
O34 |
O |
O6 |
N |
N |
N |
0 |
1.923 |
4.105 |
1.288 |
20 |
O44 |
O |
O7 |
N |
N |
N |
0 |
0.052 |
5.257 |
-0.155 |
21 |
O24 |
O |
O8 |
N |
N |
N |
0 |
-0.524 |
3.635 |
1.691 |
22 |
O13 |
O |
O9 |
N |
N |
N |
0 |
3.118 |
1.608 |
-0.333 |
23 |
PA3 |
P |
P3 |
N |
N |
N |
0 |
3.997 |
2.419 |
-1.41 |
24 |
O33 |
O |
O10 |
N |
N |
N |
0 |
4.49 |
1.486 |
-2.448 |
25 |
O43 |
O |
O11 |
N |
N |
N |
0 |
3.087 |
3.555 |
-2.099 |
26 |
O23 |
O |
O12 |
N |
N |
N |
0 |
5.249 |
3.11 |
-0.67 |
27 |
O12 |
O |
O13 |
N |
N |
N |
0 |
2.431 |
-0.691 |
1.158 |
28 |
PA2 |
P |
P4 |
N |
N |
N |
0 |
3.781 |
-1.231 |
1.85 |
29 |
O32 |
O |
O14 |
N |
N |
N |
0 |
4.942 |
-0.484 |
1.318 |
30 |
O42 |
O |
O15 |
N |
N |
N |
0 |
3.69 |
-1.017 |
3.443 |
31 |
O22 |
O |
O16 |
N |
N |
N |
0 |
3.958 |
-2.799 |
1.529 |
32 |
O11 |
O |
O17 |
N |
N |
N |
0 |
1.281 |
-2.861 |
-0.238 |
33 |
PA1 |
P |
P5 |
N |
N |
N |
0 |
1.319 |
-4.094 |
-1.272 |
34 |
O31 |
O |
O18 |
N |
N |
N |
0 |
1.475 |
-5.473 |
-0.456 |
35 |
O41 |
O |
O19 |
N |
N |
N |
0 |
0.063 |
-4.122 |
-2.053 |
36 |
O21 |
O |
O20 |
N |
N |
N |
0 |
2.569 |
-3.918 |
-2.272 |
37 |
O16 |
O |
O21 |
N |
N |
N |
0 |
-1.331 |
-1.788 |
-0.311 |
38 |
PA6 |
P |
P6 |
N |
N |
N |
0 |
-2.21 |
-2.6 |
0.766 |
39 |
O36 |
O |
O22 |
N |
N |
N |
0 |
-3.303 |
-3.5 |
-0.001 |
40 |
O46 |
O |
O23 |
N |
N |
N |
0 |
-1.325 |
-3.475 |
1.567 |
41 |
O26 |
O |
O24 |
N |
N |
N |
0 |
-2.96 |
-1.56 |
1.74 |
42 |
H1 |
H |
H1 |
N |
N |
N |
0 |
-1.585 |
1.476 |
1.105 |
43 |
H2 |
H |
H2 |
N |
N |
N |
0 |
1.856 |
0.834 |
-1.774 |
44 |
H3 |
H |
H3 |
N |
N |
N |
0 |
0.881 |
1.296 |
1.081 |
45 |
H4 |
H |
H4 |
N |
N |
N |
0 |
-0.601 |
0.5 |
-1.466 |
46 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-0.069 |
-1.015 |
1.13 |
47 |
H6 |
H |
H6 |
N |
N |
N |
0 |
0.906 |
-1.476 |
-1.725 |
48 |
H7 |
H |
H7 |
N |
N |
N |
0 |
3.142 |
-1.024 |
-0.753 |
49 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-4.72 |
1.115 |
-2.507 |
50 |
H9 |
H |
H9 |
N |
N |
N |
0 |
-6.426 |
-1.156 |
-1.128 |
51 |
H10 |
H |
H10 |
N |
N |
N |
0 |
2.624 |
4.291 |
0.649 |
52 |
H11 |
H |
H11 |
N |
N |
N |
0 |
0.008 |
6.043 |
0.407 |
53 |
H12 |
H |
H12 |
N |
N |
N |
0 |
2.729 |
4.203 |
-1.477 |
54 |
H13 |
H |
H13 |
N |
N |
N |
0 |
5.823 |
3.617 |
-1.26 |
55 |
H14 |
H |
H14 |
N |
N |
N |
0 |
4.47 |
-1.32 |
3.926 |
56 |
H15 |
H |
H15 |
N |
N |
N |
0 |
3.232 |
-3.351 |
1.85 |
57 |
H16 |
H |
H16 |
N |
N |
N |
0 |
1.505 |
-6.261 |
-1.017 |
58 |
H17 |
H |
H17 |
N |
N |
N |
0 |
3.427 |
-3.891 |
-1.827 |
59 |
H18 |
H |
H18 |
N |
N |
N |
0 |
-3.869 |
-4.017 |
0.587 |
60 |
H19 |
H |
H19 |
N |
N |
N |
0 |
-3.558 |
-0.954 |
1.282 |
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