Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : L07

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 30


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C7 C C7 N N N 0 -4.308 0.33 0.802
2 C8 C C8 N N N 0 -5.824 0.45 0.634
3 C12 C C12 N Y N 0 3.947 -0.337 0.266
4 C11 C C11 N Y N 0 4.451 0.93 0.278
5 C10 C C10 N Y N 0 3.615 2.034 0.15
6 C9 C C9 N Y N 0 2.267 1.877 0.009
7 N2 N N2 N Y N 0 -1.525 -0.986 -0.305
8 N1 N N1 N Y N 0 2.042 -1.77 0.103
9 N N N N N N 0 0.307 -3.305 -0.033
10 C2 C C2 N Y N 0 1.719 0.59 -0.006
11 C3 C C3 N Y N 0 0.285 0.368 -0.154
12 C4 C C4 N Y N 0 -0.191 -0.941 -0.162
13 C5 C C5 N Y N 0 -2.155 0.124 -0.411
14 C6 C C6 N N N 0 -3.648 0.242 -0.576
15 C1 C C1 N Y N 0 2.566 -0.537 0.124
16 C C C N Y N 0 0.758 -1.996 -0.023
17 S S S N Y N 0 -1.086 1.453 -0.34
18 H1 H H1 N N N 0 -3.931 1.205 1.33
19 H2 H H2 N N N 0 -4.076 -0.568 1.374
20 H3 H H3 N N N 0 -6.057 1.348 0.062
21 H4 H H4 N N N 0 -6.202 -0.426 0.105
22 H5 H H5 N N N 0 -6.295 0.513 1.615
23 H6 H H6 N N N 0 4.61 -1.184 0.362
24 H7 H H7 N N N 0 5.515 1.078 0.388
25 H8 H H8 N N N 0 4.037 3.028 0.163
26 H9 H H9 N N N 0 1.626 2.74 -0.089
27 H10 H H10 N N N 0 0.939 -4.036 0.052
28 H11 H H11 N N N 0 -0.64 -3.491 -0.126
29 H12 H H12 N N N 0 -4.026 -0.634 -1.104
30 H13 H H13 N N N 0 -3.881 1.14 -1.148