Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : L34

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 55


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N2A N N2A N N N 0 0.146 -1.459 9.081
2 N1 N N1 N Y N 0 -1.011 -0.268 7.441
3 C2 C C2 N Y N 0 0.073 -0.938 7.799
4 N3 N N3 N Y N 0 1.089 -1.133 6.971
5 C4 C C4 N Y N 0 1.058 -0.653 5.729
6 O4A O O4A N N N 0 2.098 -0.855 4.881
7 C4A C C4A N Y N 0 -0.058 0.056 5.322
8 N5 N N5 N N N 0 -0.193 0.597 4.033
9 C6 C C6 R N N 0 -1.18 1.669 3.754
10 C7 C C7 N N N 0 -2.489 1.244 4.429
11 N8 N N8 N N N 0 -2.212 0.991 5.852
12 C8A C C8A N Y N 0 -1.113 0.248 6.221
13 CX C CX N N N 0 0.418 0.275 2.896
14 OX O OX N N N 0 1.433 -0.392 2.85
15 C9 C C9 N N N 0 -1.291 1.65 2.222
16 N10 N N10 N N N 0 -0.193 0.761 1.804
17 C1B C C1B N Y N 0 0.153 0.471 0.485
18 C2B C C2B N Y N 0 1.215 -0.388 0.22
19 C3B C C3B N Y N 0 1.56 -0.676 -1.08
20 C4B C C4B N Y N 0 0.843 -0.106 -2.135
21 C5B C C5B N Y N 0 -0.223 0.755 -1.865
22 C6B C C6B N Y N 0 -0.566 1.036 -0.562
23 C7B C C7B N N N 0 1.211 -0.413 -3.53
24 O7B O O7B N N N 0 2.139 -1.163 -3.764
25 N N N N N N 0 0.518 0.137 -4.547
26 CA C CA S N N 0 0.883 -0.167 -5.932
27 CB C CB N N N 0 -0.363 -0.095 -6.816
28 CG C CG N N N 0 -1.395 -1.112 -6.325
29 CD C CD N N N 0 -2.623 -1.041 -7.196
30 OE1 O OE1 N N N 0 -2.668 -0.257 -8.115
31 OE2 O OE2 N N N 0 -3.667 -1.848 -6.951
32 C C C N N N 0 1.9 0.834 -6.416
33 O O O N N N 0 2.717 0.513 -7.246
34 OXT O OXT N N N 0 1.898 2.083 -5.924
35 HN21 H 1HN2 N N N 0 -0.586 -1.323 9.702
36 HN22 H 2HN2 N N N 0 0.931 -1.956 9.359
37 HO4 H HO4 N N N 0 1.92 -1.681 4.413
38 H6 H H6 N N N 0 -0.838 2.637 4.119
39 H71 H 1H7 N N N 0 -3.227 2.041 4.334
40 H72 H 2H7 N N N 0 -2.866 0.335 3.961
41 HN8 H HN8 N N N 0 -2.822 1.327 6.527
42 H91 H 1H9 N N N 0 -2.253 1.242 1.913
43 H92 H 2H9 N N N 0 -1.149 2.651 1.816
44 H2B H H2B N N N 0 1.769 -0.828 1.036
45 H3B H H3B N N N 0 2.385 -1.343 -1.285
46 H5B H H5B N N N 0 -0.779 1.198 -2.678
47 H6B H H6B N N N 0 -1.39 1.702 -0.352
48 HN H HN N N N 0 -0.222 0.735 -4.361
49 HA H HA N N N 0 1.308 -1.169 -5.984
50 HB1 H 1HB N N N 0 -0.787 0.907 -6.764
51 HB2 H 2HB N N N 0 -0.091 -0.321 -7.847
52 HG1 H 1HG N N N 0 -0.97 -2.114 -6.377
53 HG2 H 2HG N N N 0 -1.667 -0.885 -5.294
54 HE2 H HE2 N N N 0 -4.455 -1.803 -7.509
55 HXT H HXT N N N 0 2.551 2.726 -6.234