Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : L5N

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAT C C1 N Y N 0 -3.306 -1.572 -1.039
2 CAX C C2 N Y N 0 -4.033 -2.411 -0.221
3 CBA C C3 N Y N 0 -5.217 -1.956 0.365
4 CBB C C4 N N N 0 -6.0 -2.849 1.243
5 OBD O O1 N N N 0 -5.616 -3.981 1.457
6 OBC O O2 N N N 0 -7.141 -2.407 1.807
7 CAY C C5 N Y N 0 -5.655 -0.654 0.117
8 CAU C C6 N Y N 0 -4.918 0.174 -0.704
9 CAQ C C7 N Y N 0 -3.744 -0.281 -1.276
10 CAN C C8 N N N 0 -2.944 0.63 -2.172
11 NAI N N1 N N N 0 -1.975 1.378 -1.368
12 CAE C C9 N N N 0 -2.221 2.57 -0.794
13 OAK O O3 N N N 0 -3.266 3.186 -0.858
14 CAD C C10 N N N 0 -0.724 0.961 -1.101
15 OAJ O O4 N N N 0 -0.227 -0.079 -1.484
16 CAA C C11 N Y N 0 -0.057 1.977 -0.268
17 CAB C C12 N Y N 0 -1.007 3.002 -0.07
18 CAF C C13 N Y N 0 -0.676 4.112 0.686
19 CAL C C14 N Y N 0 0.59 4.216 1.246
20 CAH C C15 N Y N 0 1.526 3.222 1.056
21 CAC C C16 N Y N 0 1.21 2.091 0.301
22 NAG N N2 N N N 0 2.153 1.086 0.117
23 CAM C C17 N N N 0 3.145 0.921 1.014
24 OAP O O5 N N N 0 3.159 1.583 2.035
25 CAO C C18 N Y N 0 4.206 -0.055 0.76
26 CAS C C19 N Y N 0 5.262 -0.313 1.589
27 CAW C C20 N Y N 0 6.111 -1.279 1.106
28 CAV C C21 N Y N 0 5.764 -1.797 -0.081
29 CLA CL CL1 N N N 0 6.658 -3.03 -0.915
30 SAR S S1 N Y N 0 4.323 -1.089 -0.658
31 H1 H H1 N N N 0 -2.391 -1.922 -1.493
32 H2 H H2 N N N 0 -3.689 -3.417 -0.033
33 H3 H H3 N N N 0 -7.62 -3.027 2.374
34 H4 H H4 N N N 0 -6.57 -0.296 0.567
35 H5 H H5 N N N 0 -5.257 1.182 -0.896
36 H6 H H6 N N N 0 -2.416 0.034 -2.917
37 H7 H H7 N N N 0 -3.615 1.327 -2.674
38 H8 H H8 N N N 0 -1.402 4.897 0.841
39 H9 H H9 N N N 0 0.845 5.085 1.836
40 H10 H H10 N N N 0 2.507 3.316 1.497
41 H11 H H11 N N N 0 2.096 0.504 -0.657
42 H12 H H12 N N N 0 5.414 0.193 2.532
43 H13 H H13 N N N 0 6.993 -1.597 1.642