Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : L82

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 60


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -1.169 -0.051 -0.103
2 C14 C C2 N N N 0 2.04 0.101 -0.892
3 C5 C C3 N N N 0 -2.289 -0.196 -1.136
4 C6 C C4 N N N 0 -4.426 0.84 -0.251
5 C11 C C5 N Y N 0 -6.773 -1.651 1.298
6 C7 C C6 N Y N 0 -4.933 -0.342 0.482
7 C8 C C7 N Y N 0 -4.04 -1.253 1.045
8 C9 C C8 N Y N 0 -4.519 -2.349 1.732
9 C10 C C9 N Y N 0 -5.883 -2.551 1.854
10 C12 C C10 N Y N 0 -6.307 -0.548 0.613
11 C13 C C11 N N N 0 -3.136 2.134 -1.497
12 N1 N N1 N N N 0 -3.249 0.898 -0.972
13 N2 N N2 N N N 0 -5.018 1.998 -0.33
14 C3 C C12 N N N 0 -0.24 -1.264 -0.184
15 N3 N N3 N N N 0 -4.217 2.842 -1.112
16 C1 C C13 N N N 0 1.756 -2.344 0.815
17 C15 C C14 N Y N 0 3.018 -1.006 -1.192
18 C16 C C15 N Y N 0 2.557 -2.205 -1.703
19 C17 C C16 N Y N 0 3.466 -3.215 -1.98
20 C18 C C17 N Y N 0 4.81 -2.98 -1.732
21 C19 C C18 N Y N 0 5.196 -1.756 -1.22
22 C2 C C19 S N N 0 0.88 -1.118 0.849
23 C20 C C20 N N N 0 2.888 0.129 1.376
24 C21 C C21 N Y N 0 3.386 1.549 1.44
25 C22 C C22 N Y N 0 3.013 2.356 2.498
26 C23 C C23 N Y N 0 3.481 3.661 2.551
27 C24 C C24 N Y N 0 4.311 4.105 1.533
28 C25 C C25 N Y N 0 4.641 3.24 0.507
29 N4 N N4 N N N 0 1.686 0.069 0.533
30 N5 N N5 N Y N 0 4.304 -0.818 -0.968
31 N6 N N6 N Y N 0 4.177 2.006 0.489
32 O1 O O1 N N N 0 1.202 -3.566 0.839
33 O2 O O2 N N N 0 2.958 -2.226 0.767
34 S1 S S1 N N N 0 -1.849 2.703 -2.473
35 H1 H H1 N N N 0 -0.601 0.857 -0.309
36 H2 H H2 N N N 0 -1.601 0.01 0.896
37 H3 H H3 N N N 0 2.495 1.062 -1.132
38 H4 H H4 N N N 0 1.141 -0.036 -1.493
39 H5 H H5 N N N 0 -1.864 -0.16 -2.139
40 H6 H H6 N N N 0 -2.796 -1.15 -0.99
41 H7 H H7 N N N 0 -7.837 -1.814 1.397
42 H8 H H8 N N N 0 -2.976 -1.099 0.947
43 H12 H H12 N N N 0 -0.808 -2.171 0.022
44 H9 H H9 N N N 0 -3.829 -3.056 2.169
45 H10 H H10 N N N 0 -6.253 -3.415 2.386
46 H11 H H11 N N N 0 -7.003 0.154 0.179
47 H13 H H13 N N N 0 0.193 -1.324 -1.183
48 H14 H H14 N N N 0 -4.408 3.766 -1.339
49 H15 H H15 N N N 0 1.503 -2.353 -1.884
50 H16 H H16 N N N 0 3.135 -4.162 -2.38
51 H17 H H17 N N N 0 5.545 -3.744 -1.936
52 H18 H H18 N N N 0 6.241 -1.565 -1.023
53 H19 H H19 N N N 0 0.446 -1.009 1.842
54 H20 H H20 N N N 0 3.662 -0.509 0.95
55 H21 H H21 N N N 0 2.644 -0.217 2.38
56 H22 H H22 N N N 0 2.364 1.977 3.274
57 H23 H H23 N N N 0 3.206 4.314 3.365
58 H24 H H24 N N N 0 4.694 5.115 1.542
59 H25 H H25 N N N 0 5.287 3.579 -0.29
60 H27 H H27 N N N 0 1.805 -4.322 0.816