Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LDU

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2 O O2 N N N 0 0.442 1.77 -0.195
2 C4 C C4 S N N 0 0.466 0.683 0.732
3 C3 C C3 R N N 0 1.677 -0.231 0.455
4 O1 O O1 N N N 0 2.433 0.268 -0.65
5 C2 C C2 N N N 0 1.071 -1.609 0.112
6 N N N N N N 0 -0.302 -1.304 -0.368
7 C5 C C5 R N N 0 -0.771 -0.22 0.533
8 H2 H H2 N N N 0 1.218 2.345 -0.146
9 C6 C C6 N N N 0 -1.905 0.568 -0.126
10 O O O N N N 0 -3.075 -0.249 -0.195
11 H4 H H4 N N N 0 0.501 1.058 1.755
12 H3 H H3 N N N 0 2.307 -0.304 1.342
13 H5 H H5 N N N 0 -1.098 -0.633 1.487
14 H1 H H1 N N N 0 3.208 -0.267 -0.87
15 H21C H H21C N N N 0 1.649 -2.094 -0.674
16 H22C H H22C N N N 0 1.032 -2.239 1.0
17 H H H N N N 0 -0.289 -0.996 -1.329
18 H61C H H61C N N N 0 -2.119 1.459 0.464
19 H62C H H62C N N N 0 -1.607 0.862 -1.133
20 HA H HA N N N 0 -3.836 0.187 -0.603