Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LEK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N Y N 0 -4.3 -1.055 -0.429
2 C5 C C2 N Y N 0 -4.21 0.328 -0.428
3 C6 C C3 N N N 0 -5.464 1.161 -0.498
4 N1 N N1 N N N 0 -5.946 1.436 0.862
5 C7 C C4 N N N 0 -7.169 2.249 0.833
6 C8 C C5 N Y N 0 -2.979 0.944 -0.364
7 N2 N N2 N Y N 0 4.585 -0.622 -0.048
8 C9 C C6 N Y N 0 -1.822 0.172 -0.299
9 C10 C C7 N Y N 0 -0.387 0.501 -0.222
10 C11 C C8 N Y N 0 0.318 1.703 -0.188
11 C12 C C9 N Y N 0 1.682 1.695 -0.114
12 C13 C C10 N Y N 0 2.378 0.484 -0.073
13 C14 C C11 N Y N 0 3.858 0.485 0.006
14 C15 C C12 N Y N 0 4.585 1.613 0.14
15 C3 C C13 N Y N 0 -3.163 -1.832 -0.359
16 C2 C C14 N Y N 0 -1.91 -1.229 -0.299
17 C18 C C15 N Y N 0 0.3 -0.723 -0.181
18 N N N3 N Y N 0 -0.629 -1.747 -0.228
19 C1 C C16 N N N 0 -0.304 -3.175 -0.205
20 C C C17 N N N 0 -0.269 -3.668 1.243
21 C17 C C18 N Y N 0 1.687 -0.723 -0.106
22 C16 C C19 N Y N 0 5.864 -0.49 0.031
23 S S S1 N Y N 0 6.286 1.158 0.192
24 H1 H H1 N N N 0 -5.269 -1.529 -0.48
25 H2 H H2 N N N 0 -5.247 2.102 -1.004
26 H3 H H3 N N N 0 -6.23 0.619 -1.053
27 H4 H H4 N N N 0 -6.093 0.579 1.374
28 H6 H H6 N N N 0 -7.504 2.438 1.853
29 H7 H H7 N N N 0 -6.964 3.197 0.336
30 H8 H H8 N N N 0 -7.948 1.714 0.288
31 H9 H H9 N N N 0 -2.911 2.022 -0.364
32 H10 H H10 N N N 0 -0.215 2.642 -0.22
33 H11 H H11 N N N 0 2.225 2.628 -0.088
34 H12 H H12 N N N 0 4.194 2.618 0.203
35 H13 H H13 N N N 0 -3.244 -2.909 -0.356
36 H14 H H14 N N N 0 -1.062 -3.73 -0.759
37 H15 H H15 N N N 0 0.671 -3.333 -0.666
38 H16 H H16 N N N 0 0.489 -3.114 1.797
39 H17 H H17 N N N 0 -1.244 -3.51 1.704
40 H18 H H18 N N N 0 -0.027 -4.731 1.26
41 H19 H H19 N N N 0 2.228 -1.657 -0.074
42 H20 H H20 N N N 0 6.57 -1.307 0.001