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PDBeChem : Atoms of Molecule
Molecule : LIV
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 107
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C11 |
C |
C11 |
S |
N |
N |
0 |
-4.807 |
1.406 |
-0.569 |
2 |
O11 |
O |
O11 |
N |
N |
N |
0 |
-5.277 |
0.67 |
0.563 |
3 |
C21 |
C |
C21 |
R |
N |
N |
0 |
-4.021 |
2.629 |
-0.091 |
4 |
N21 |
N |
N21 |
N |
N |
N |
0 |
-2.861 |
2.191 |
0.696 |
5 |
C31 |
C |
C31 |
N |
N |
N |
0 |
-4.932 |
3.499 |
0.781 |
6 |
C41 |
C |
C41 |
S |
N |
N |
0 |
-6.209 |
3.813 |
-0.006 |
7 |
O41 |
O |
O41 |
N |
N |
N |
0 |
-7.137 |
4.498 |
0.837 |
8 |
C51 |
C |
C51 |
R |
N |
N |
0 |
-6.831 |
2.501 |
-0.491 |
9 |
O51 |
O |
O51 |
N |
N |
N |
0 |
-5.92 |
1.826 |
-1.356 |
10 |
C61 |
C |
C61 |
N |
N |
N |
0 |
-8.124 |
2.803 |
-1.25 |
11 |
O61 |
O |
O61 |
N |
N |
N |
0 |
-8.759 |
1.576 |
-1.615 |
12 |
C12 |
C |
C12 |
R |
N |
N |
0 |
-6.089 |
-3.483 |
0.519 |
13 |
C52 |
C |
C52 |
R |
N |
N |
0 |
-4.496 |
-1.587 |
0.191 |
14 |
N12 |
N |
N12 |
N |
N |
N |
0 |
-6.497 |
-4.806 |
0.027 |
15 |
C62 |
C |
C62 |
S |
N |
N |
0 |
-4.921 |
-2.964 |
-0.322 |
16 |
O62 |
O |
O62 |
N |
N |
N |
0 |
-3.821 |
-3.87 |
-0.221 |
17 |
O52 |
O |
O52 |
N |
N |
N |
0 |
-3.405 |
-1.101 |
-0.595 |
18 |
C42 |
C |
C42 |
R |
N |
N |
0 |
-5.674 |
-0.616 |
0.083 |
19 |
C32 |
C |
C32 |
S |
N |
N |
0 |
-6.841 |
-1.136 |
0.925 |
20 |
N32 |
N |
N32 |
N |
N |
N |
0 |
-7.972 |
-0.204 |
0.821 |
21 |
C22 |
C |
C22 |
N |
N |
N |
0 |
-7.266 |
-2.513 |
0.411 |
22 |
C13 |
C |
C13 |
S |
N |
N |
0 |
-2.207 |
-1.554 |
0.038 |
23 |
C23 |
C |
C23 |
R |
N |
N |
0 |
-0.974 |
-1.18 |
-0.815 |
24 |
O23 |
O |
O23 |
N |
N |
N |
0 |
-0.551 |
-2.294 |
-1.604 |
25 |
C33 |
C |
C33 |
S |
N |
N |
0 |
0.106 |
-0.814 |
0.227 |
26 |
C44 |
C |
C44 |
S |
N |
N |
0 |
4.736 |
-0.061 |
-1.445 |
27 |
C43 |
C |
C43 |
R |
N |
N |
0 |
-0.599 |
-1.008 |
1.588 |
28 |
O43 |
O |
O43 |
N |
N |
N |
0 |
-2.008 |
-0.869 |
1.294 |
29 |
C53 |
C |
C53 |
N |
N |
N |
0 |
-0.155 |
0.065 |
2.584 |
30 |
O53 |
O |
O53 |
N |
N |
N |
0 |
-0.788 |
-0.163 |
3.844 |
31 |
O44 |
O |
O44 |
N |
N |
N |
0 |
5.512 |
-0.355 |
-0.282 |
32 |
C34 |
C |
C34 |
R |
N |
N |
0 |
4.253 |
-1.369 |
-2.083 |
33 |
O34 |
O |
O34 |
N |
N |
N |
0 |
3.598 |
-1.09 |
-3.322 |
34 |
C24 |
C |
C24 |
R |
N |
N |
0 |
3.271 |
-2.049 |
-1.123 |
35 |
N24 |
N |
N24 |
N |
N |
N |
0 |
3.98 |
-2.467 |
0.094 |
36 |
C14 |
C |
C14 |
R |
N |
N |
0 |
2.165 |
-1.056 |
-0.756 |
37 |
O33 |
O |
O33 |
N |
N |
N |
0 |
1.228 |
-1.692 |
0.115 |
38 |
C54 |
C |
C54 |
S |
N |
N |
0 |
3.519 |
0.781 |
-1.055 |
39 |
O54 |
O |
O54 |
N |
N |
N |
0 |
2.731 |
0.076 |
-0.098 |
40 |
C64 |
C |
C64 |
N |
N |
N |
0 |
3.99 |
2.105 |
-0.449 |
41 |
N64 |
N |
N64 |
N |
N |
N |
0 |
2.831 |
2.974 |
-0.21 |
42 |
C15 |
C |
C15 |
R |
N |
N |
0 |
6.834 |
-0.655 |
-0.732 |
43 |
C25 |
C |
C25 |
S |
N |
N |
0 |
7.625 |
-1.304 |
0.407 |
44 |
C35 |
C |
C35 |
S |
N |
N |
0 |
7.664 |
-0.344 |
1.6 |
45 |
C45 |
C |
C45 |
S |
N |
N |
0 |
8.202 |
1.009 |
1.122 |
46 |
C55 |
C |
C55 |
R |
N |
N |
0 |
7.369 |
1.484 |
-0.07 |
47 |
C65 |
C |
C65 |
N |
N |
N |
0 |
7.879 |
2.851 |
-0.533 |
48 |
O25 |
O |
O25 |
N |
N |
N |
0 |
8.957 |
-1.579 |
-0.03 |
49 |
O35 |
O |
O35 |
N |
N |
N |
0 |
8.521 |
-0.87 |
2.614 |
50 |
O45 |
O |
O45 |
N |
N |
N |
0 |
8.11 |
1.963 |
2.181 |
51 |
O55 |
O |
O55 |
N |
N |
N |
0 |
7.48 |
0.549 |
-1.142 |
52 |
O65 |
O |
O65 |
N |
N |
N |
0 |
7.027 |
3.353 |
-1.564 |
53 |
H11 |
H |
H11 |
N |
N |
N |
0 |
-4.157 |
0.77 |
-1.17 |
54 |
H21 |
H |
H21 |
N |
N |
N |
0 |
-3.682 |
3.204 |
-0.952 |
55 |
H211 |
H |
1H21 |
N |
N |
N |
0 |
-2.38 |
3.026 |
0.993 |
56 |
H212 |
H |
2H21 |
N |
N |
N |
0 |
-3.224 |
1.753 |
1.529 |
57 |
H311 |
H |
1H31 |
N |
N |
N |
0 |
-4.419 |
4.428 |
1.032 |
58 |
H312 |
H |
2H31 |
N |
N |
N |
0 |
-5.187 |
2.962 |
1.694 |
59 |
H41 |
H |
H41 |
N |
N |
N |
0 |
-5.964 |
4.439 |
-0.864 |
60 |
H3 |
H |
H3 |
N |
N |
N |
0 |
-6.706 |
5.317 |
1.12 |
61 |
H51 |
H |
H51 |
N |
N |
N |
0 |
-7.053 |
1.867 |
0.367 |
62 |
H611 |
H |
1H61 |
N |
N |
N |
0 |
-8.793 |
3.382 |
-0.613 |
63 |
H612 |
H |
2H61 |
N |
N |
N |
0 |
-7.893 |
3.374 |
-2.149 |
64 |
H61 |
H |
H61 |
N |
N |
N |
0 |
-9.569 |
1.811 |
-2.09 |
65 |
H12 |
H |
H12 |
N |
N |
N |
0 |
-5.778 |
-3.564 |
1.561 |
66 |
H121 |
H |
1H12 |
N |
N |
N |
0 |
-7.265 |
-5.107 |
0.608 |
67 |
H122 |
H |
2H12 |
N |
N |
N |
0 |
-6.871 |
-4.667 |
-0.9 |
68 |
H62 |
H |
H62 |
N |
N |
N |
0 |
-5.231 |
-2.883 |
-1.364 |
69 |
H2 |
H |
H2 |
N |
N |
N |
0 |
-4.131 |
-4.724 |
-0.554 |
70 |
H52 |
H |
H52 |
N |
N |
N |
0 |
-4.186 |
-1.667 |
1.233 |
71 |
H42 |
H |
H42 |
N |
N |
N |
0 |
-5.984 |
-0.536 |
-0.958 |
72 |
H32 |
H |
H32 |
N |
N |
N |
0 |
-6.531 |
-1.216 |
1.966 |
73 |
H321 |
H |
1H32 |
N |
N |
N |
0 |
-8.752 |
-0.642 |
1.288 |
74 |
H322 |
H |
2H32 |
N |
N |
N |
0 |
-7.728 |
0.61 |
1.365 |
75 |
H221 |
H |
1H22 |
N |
N |
N |
0 |
-7.577 |
-2.433 |
-0.63 |
76 |
H222 |
H |
2H22 |
N |
N |
N |
0 |
-8.098 |
-2.883 |
1.011 |
77 |
H13 |
H |
H13 |
N |
N |
N |
0 |
-2.246 |
-2.632 |
0.196 |
78 |
H23 |
H |
H23 |
N |
N |
N |
0 |
-1.196 |
-0.324 |
-1.452 |
79 |
H1 |
H |
H1 |
N |
N |
N |
0 |
-1.262 |
-2.476 |
-2.234 |
80 |
H33 |
H |
H33 |
N |
N |
N |
0 |
0.42 |
0.222 |
0.104 |
81 |
H43 |
H |
H43 |
N |
N |
N |
0 |
-0.39 |
-2.001 |
1.984 |
82 |
H531 |
H |
1H53 |
N |
N |
N |
0 |
0.928 |
0.021 |
2.708 |
83 |
H532 |
H |
2H53 |
N |
N |
N |
0 |
-0.437 |
1.049 |
2.208 |
84 |
H53 |
H |
H53 |
N |
N |
N |
0 |
-0.481 |
0.533 |
4.441 |
85 |
H44 |
H |
H44 |
N |
N |
N |
0 |
5.345 |
0.49 |
-2.16 |
86 |
H34 |
H |
H34 |
N |
N |
N |
0 |
5.105 |
-2.026 |
-2.26 |
87 |
H4 |
H |
H4 |
N |
N |
N |
0 |
3.302 |
-1.939 |
-3.679 |
88 |
H24 |
H |
H24 |
N |
N |
N |
0 |
2.832 |
-2.921 |
-1.607 |
89 |
H242 |
H |
2H24 |
N |
N |
N |
0 |
4.624 |
-3.193 |
-0.181 |
90 |
H241 |
H |
1H24 |
N |
N |
N |
0 |
3.294 |
-2.9 |
0.694 |
91 |
H14 |
H |
H14 |
N |
N |
N |
0 |
1.655 |
-0.731 |
-1.662 |
92 |
H54 |
H |
H54 |
N |
N |
N |
0 |
2.918 |
0.982 |
-1.942 |
93 |
H11A |
H |
1H1 |
N |
N |
N |
0 |
4.677 |
2.596 |
-1.139 |
94 |
H12A |
H |
2H1 |
N |
N |
N |
0 |
4.5 |
1.911 |
0.495 |
95 |
H25 |
H |
H25 |
N |
N |
N |
0 |
7.138 |
-2.234 |
0.702 |
96 |
H641 |
H |
1H64 |
N |
N |
N |
0 |
3.187 |
3.831 |
0.187 |
97 |
H642 |
H |
2H64 |
N |
N |
N |
0 |
2.454 |
3.21 |
-1.116 |
98 |
H15 |
H |
H15 |
N |
N |
N |
0 |
6.782 |
-1.343 |
-1.576 |
99 |
H35 |
H |
H35 |
N |
N |
N |
0 |
6.658 |
-0.217 |
2.0 |
100 |
H45 |
H |
H45 |
N |
N |
N |
0 |
9.244 |
0.901 |
0.819 |
101 |
H55 |
H |
H55 |
N |
N |
N |
0 |
6.324 |
1.57 |
0.229 |
102 |
H651 |
H |
1H65 |
N |
N |
N |
0 |
7.877 |
3.543 |
0.309 |
103 |
H652 |
H |
2H65 |
N |
N |
N |
0 |
8.893 |
2.749 |
-0.918 |
104 |
H7 |
H |
H7 |
N |
N |
N |
0 |
8.886 |
-2.185 |
-0.78 |
105 |
H6 |
H |
H6 |
N |
N |
N |
0 |
8.146 |
-1.719 |
2.885 |
106 |
H5 |
H |
H5 |
N |
N |
N |
0 |
8.648 |
1.625 |
2.91 |
107 |
H65 |
H |
H65 |
N |
N |
N |
0 |
7.382 |
4.213 |
-1.827 |
|