Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LK7

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 38


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -4.174 0.723 -1.573
2 C2 C C2 N N N 0 -3.861 0.354 -0.145
3 C3 C C3 N N N 0 -2.643 -0.085 0.179
4 C4 C C4 N N N 0 -2.34 -0.443 1.564
5 O1 O O1 N N N 0 -1.232 -0.842 1.859
6 C5 C C5 R N N 0 -1.581 -0.212 -0.882
7 N1 N N1 N N N 0 -0.838 -1.473 -0.72
8 C6 C C6 N N N 0 0.473 -1.187 -0.341
9 C7 C C7 N N N 0 1.482 -2.226 -0.059
10 O2 O O2 N N N 0 2.608 -1.906 0.267
11 O3 O O3 N N N 0 1.154 -3.529 -0.163
12 C8 C C8 N N N 0 0.72 0.105 -0.259
13 C9 C C9 S N N 0 -0.515 0.874 -0.707
14 C10 C C10 N N N 0 -0.86 1.844 0.424
15 C11 C C11 N N N 0 0.378 2.695 0.725
16 C12 C C12 N N N 0 1.52 1.839 1.266
17 C13 C C13 S N N 0 1.969 0.819 0.206
18 O4 O O4 N N N 0 2.585 1.494 -0.893
19 C14 C C14 N N N 0 4.005 1.609 -0.782
20 H11 H 1H1 N N N 0 -3.51 1.526 -1.894
21 H12 H 2H1 N N N 0 -4.029 -0.147 -2.213
22 H13A H 3H1 N N N 0 -5.209 1.057 -1.643
23 H2 H H2 N N N 0 -4.622 0.445 0.615
24 H4 H H4 N N N 0 -3.101 -0.352 2.325
25 H5 H H5 N N N 0 -2.026 -0.154 -1.876
26 HN1 H HN1 N N N 0 -1.203 -2.362 -0.856
27 HO3 H HO3 N N N 0 1.849 -4.173 0.031
28 H9 H H9 N N N 0 -0.333 1.4 -1.645
29 H101 H 1H10 N N N 0 -1.684 2.489 0.117
30 H102 H 2H10 N N N 0 -1.146 1.283 1.314
31 H111 H 1H11 N N N 0 0.704 3.188 -0.191
32 H112 H 2H11 N N N 0 0.119 3.453 1.464
33 H121 H 1H12 N N N 0 2.361 2.482 1.528
34 H122 H 2H12 N N N 0 1.184 1.308 2.157
35 H13 H H13 N N N 0 2.666 0.105 0.645
36 H141 H 1H14 N N N 0 4.256 2.167 0.12
37 H142 H 2H14 N N N 0 4.447 0.614 -0.728
38 H143 H 3H14 N N N 0 4.397 2.133 -1.654