Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LL7

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 69


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C02 C C1 N N N 0 2.635 1.669 -0.361
2 C03 C C2 S N N 0 3.89 2.421 -0.001
3 C04 C C3 N N N 0 4.477 3.073 -1.256
4 C05 C C4 N N N 0 5.822 3.716 -0.911
5 C06 C C5 N N N 0 6.795 2.639 -0.426
6 C07 C C6 N N N 0 6.234 1.982 0.839
7 C10 C C7 N N N 0 4.788 -0.943 -0.715
8 C11 C C8 N Y N 0 4.455 -2.405 -0.568
9 C12 C C9 N Y N 0 3.177 -2.853 -0.843
10 C13 C C10 N Y N 0 2.871 -4.195 -0.707
11 C14 C C11 N Y N 0 3.843 -5.087 -0.296
12 C15 C C12 N Y N 0 5.121 -4.638 -0.021
13 C16 C C13 N Y N 0 5.429 -3.298 -0.162
14 C20 C C14 N N N 0 0.221 1.356 -0.245
15 C21 C C15 N N N 0 -0.985 2.033 0.41
16 C22 C C16 N N N 0 -2.24 1.282 0.049
17 C24 C C17 N Y N 0 -4.583 0.934 0.283
18 C25 C C18 N Y N 0 -4.495 -0.45 0.224
19 C26 C C19 N Y N 0 -5.633 -1.209 -0.001
20 C28 C C20 N N N 0 -4.25 -3.14 0.119
21 C29 C C21 N Y N 0 -6.863 -0.583 -0.166
22 C31 C C22 N N N 0 -8.717 -1.75 0.764
23 C32 C C23 N Y N 0 -6.951 0.803 -0.105
24 C34 C C24 N N N 0 -8.17 2.843 -0.193
25 C35 C C25 N Y N 0 -5.812 1.559 0.119
26 N08 N N1 N N N 0 4.88 1.488 0.555
27 N19 N N2 N N N 0 1.441 2.087 0.106
28 N23 N N3 N N N 0 -3.433 1.699 0.516
29 O01 O O1 N N N 0 2.698 0.692 -1.076
30 O17 O O2 N N N 0 3.084 -0.049 1.133
31 O18 O O3 N N N 0 5.41 -0.508 1.843
32 O27 O O4 N N N 0 -5.546 -2.565 -0.059
33 O30 O O5 N N N 0 -7.982 -1.327 -0.386
34 O33 O O6 N N N 0 -8.154 1.416 -0.267
35 O36 O O7 N N N 0 -2.177 0.301 -0.662
36 S09 S S1 N N N 0 4.477 -0.09 0.855
37 H1 H H1 N N N 0 3.657 3.189 0.737
38 H2 H H2 N N N 0 4.623 2.314 -2.025
39 H3 H H3 N N N 0 3.792 3.837 -1.624
40 H4 H H4 N N N 0 6.231 4.202 -1.797
41 H5 H H5 N N N 0 5.679 4.457 -0.124
42 H6 H H6 N N N 0 6.92 1.885 -1.203
43 H7 H H7 N N N 0 7.76 3.094 -0.202
44 H8 H H8 N N N 0 6.873 1.149 1.133
45 H9 H H9 N N N 0 6.197 2.715 1.645
46 H10 H H10 N N N 0 5.839 -0.835 -0.985
47 H11 H H11 N N N 0 4.166 -0.505 -1.496
48 H12 H H12 N N N 0 2.417 -2.156 -1.165
49 H13 H H13 N N N 0 1.872 -4.545 -0.923
50 H14 H H14 N N N 0 3.603 -6.134 -0.185
51 H15 H H15 N N N 0 5.881 -5.336 0.301
52 H16 H H16 N N N 0 6.427 -2.948 0.053
53 H17 H H17 N N N 0 0.298 0.329 0.111
54 H18 H H18 N N N 0 0.095 1.358 -1.328
55 H19 H H19 N N N 0 -0.859 2.032 1.492
56 H20 H H20 N N N 0 -1.062 3.061 0.054
57 H21 H H21 N N N 0 -3.539 -0.936 0.352
58 H22 H H22 N N N 0 -3.862 -2.864 1.099
59 H23 H H23 N N N 0 -4.322 -4.225 0.049
60 H24 H H24 N N N 0 -3.579 -2.769 -0.655
61 H25 H H25 N N N 0 -9.583 -2.333 0.448
62 H26 H H26 N N N 0 -8.078 -2.363 1.399
63 H27 H H27 N N N 0 -9.053 -0.875 1.322
64 H28 H H28 N N N 0 -9.188 3.203 -0.339
65 H29 H H29 N N N 0 -7.808 3.16 0.785
66 H30 H H30 N N N 0 -7.525 3.254 -0.97
67 H31 H H31 N N N 0 -5.88 2.636 0.17
68 H32 H H32 N N N 0 1.391 2.871 0.674
69 H33 H H33 N N N 0 -3.496 2.53 1.013