Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LM0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -2.332 0.548 0.268
2 C4 C C1 N N N 0 1.002 1.085 -0.708
3 C5 C C2 N Y N 0 2.448 0.996 -0.296
4 C6 C C3 N Y N 0 2.942 -0.026 0.483
5 C7 C C4 N N N 0 2.064 -1.132 1.014
6 C8 C C5 N N N 0 0.151 -2.198 -0.095
7 C10 C C6 N Y N 0 4.291 -0.056 0.81
8 C13 C C7 N Y N 0 3.307 1.994 -0.741
9 C9 C C8 N N N 0 0.869 -3.521 -0.025
10 O2 O O1 N N N 0 -0.968 -2.139 -0.558
11 N2 N N2 N N N 0 0.753 -1.08 0.358
12 C3 C C9 S N N 0 0.122 0.242 0.214
13 C2 C C10 N N N 0 -1.249 0.09 -0.391
14 O1 O O2 N N N 0 -1.379 -0.446 -1.472
15 N N N3 N N N 0 -3.607 0.406 -0.295
16 C1 C C11 N N N 0 -4.69 0.86 0.367
17 O O O3 N N N 0 -4.56 1.391 1.45
18 C C C12 N N N 0 -6.061 0.707 -0.238
19 C11 C C13 N Y N 0 5.141 0.936 0.367
20 C12 C C14 N Y N 0 4.646 1.967 -0.41
21 H1 H H1 N N N 0 -2.228 0.973 1.134
22 H2 H H2 N N N 0 0.679 2.125 -0.659
23 H3 H H3 N N N 0 0.897 0.725 -1.731
24 H4 H H4 N N N 0 2.533 -2.095 0.812
25 H5 H H5 N N N 0 1.936 -1.008 2.089
26 H6 H H6 N N N 0 4.677 -0.862 1.416
27 H7 H H7 N N N 0 2.923 2.799 -1.351
28 H8 H H8 N N N 0 1.814 -3.395 0.505
29 H9 H H9 N N N 0 0.249 -4.243 0.506
30 H10 H H10 N N N 0 1.064 -3.882 -1.034
31 H11 H H11 N N N 0 0.044 0.721 1.19
32 H12 H H12 N N N 0 -3.71 -0.019 -1.161
33 H13 H H13 N N N 0 -5.978 0.211 -1.205
34 H14 H H14 N N N 0 -6.687 0.109 0.425
35 H15 H H15 N N N 0 -6.511 1.691 -0.372
36 H16 H H16 N N N 0 6.189 0.908 0.626
37 H17 H H17 N N N 0 5.305 2.748 -0.758