Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LR4

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 59


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 S N N 0 -3.338 -1.285 -0.77
2 C5 C C2 N Y N 0 -5.089 0.012 0.495
3 C6 C C3 N Y N 0 -3.989 -0.006 -0.266
4 C7 C C4 N Y N 0 -3.492 1.328 -0.554
5 C8 C C5 N Y N 0 -4.247 2.319 0.008
6 C10 C C6 N N N 0 -3.696 -1.498 -2.242
7 C17 C C7 N Y N 0 1.276 -0.664 1.029
8 C20 C C8 N Y N 0 3.408 -0.191 2.665
9 C21 C C9 N Y N 0 2.142 -0.231 3.221
10 C22 C C10 N Y N 0 1.059 -0.472 2.389
11 C26 C C11 S N N 0 4.76 -0.564 -0.725
12 C1 C C12 N N N 0 -5.83 -1.228 0.957
13 C11 C C13 N Y N 0 -1.841 -1.184 -0.623
14 C14 C C14 N Y N 0 0.124 -0.923 0.13
15 C19 C C15 N Y N 0 3.556 -0.381 1.293
16 C2 C C16 N N N 0 -5.387 -2.415 0.097
17 C23 C C17 N N N 0 -2.327 1.58 -1.348
18 C27 C C18 N N N 0 6.179 -0.593 -1.298
19 C29 C C19 N N N 0 6.918 0.899 0.459
20 C3 C C20 N N N 0 -3.856 -2.461 0.06
21 C30 C C21 N N N 0 5.499 0.928 1.032
22 C31 C C22 N N N 0 8.194 0.718 -1.591
23 C32 C C23 N N N 0 3.967 0.569 -1.38
24 N13 N N1 N Y N 0 0.183 -1.218 -1.143
25 N15 N N2 N Y N 0 -1.184 -0.902 0.474
26 N16 N N3 N N N 0 -3.987 3.673 -0.117
27 N18 N N4 N Y N 0 2.504 -0.614 0.526
28 N24 N N5 N N N 0 -1.403 1.779 -1.977
29 N25 N N6 N N N 0 4.824 -0.342 0.726
30 N28 N N7 N N N 0 6.853 0.677 -0.992
31 O12 O O1 N Y N 0 -0.934 -1.372 -1.588
32 S9 S S1 N Y N 0 -5.551 1.661 0.882
33 H1 H H1 N N N 0 -4.779 -1.565 -2.346
34 H2 H H2 N N N 0 -3.326 -0.659 -2.831
35 H3 H H3 N N N 0 -3.238 -2.421 -2.597
36 H8 H H8 N N N 0 -5.594 -1.426 2.003
37 H4 H H4 N N N 0 4.272 -0.013 3.287
38 H5 H H5 N N N 0 2.001 -0.087 4.282
39 H6 H H6 N N N 0 0.057 -0.509 2.793
40 H7 H H7 N N N 0 4.267 -1.516 -0.925
41 H9 H H9 N N N 0 -6.903 -1.075 0.844
42 H10 H H10 N N N 0 -5.769 -3.34 0.528
43 H11 H H11 N N N 0 -5.772 -2.296 -0.915
44 H12 H H12 N N N 0 6.735 -1.417 -0.85
45 H13 H H13 N N N 0 6.132 -0.729 -2.378
46 H14 H H14 N N N 0 7.41 1.851 0.66
47 H15 H H15 N N N 0 7.482 0.092 0.927
48 H16 H H16 N N N 0 -3.531 -3.398 -0.393
49 H17 H H17 N N N 0 -3.465 -2.391 1.075
50 H18 H H18 N N N 0 5.545 1.064 2.112
51 H19 H H19 N N N 0 4.943 1.752 0.585
52 H20 H H20 N N N 0 8.111 0.618 -2.673
53 H21 H H21 N N N 0 8.671 1.668 -1.349
54 H22 H H22 N N N 0 8.794 -0.101 -1.195
55 H23 H H23 N N N 0 4.461 1.52 -1.181
56 H24 H H24 N N N 0 3.92 0.403 -2.457
57 H25 H H25 N N N 0 2.957 0.59 -0.971
58 H26 H H26 N N N 0 -3.223 3.974 -0.633
59 H27 H H27 N N N 0 -4.568 4.32 0.312