Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LYL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -0.584 -0.382 -0.379
2 C2 C C2 N Y N 0 0.563 -0.244 0.387
3 C3 C C3 N Y N 0 -1.824 -0.161 0.188
4 C4 C C4 N N N 0 -0.479 -0.769 -1.832
5 C5 C C5 N Y N 0 0.462 0.106 1.725
6 C15 C C15 N N N 0 1.707 0.252 2.562
7 O6 O O6 N N N 0 1.784 -0.461 -0.169
8 C7 C C7 N Y N 0 -1.921 0.193 1.521
9 C8 C C8 N Y N 0 -0.779 0.327 2.289
10 C13 C C13 N N N 0 -0.363 0.473 -2.675
11 C14 C C14 N N N 0 0.692 0.657 -3.429
12 HC3 H HC3 N N N 0 -2.717 -0.265 -0.408
13 HC41 H 1HC4 N N N 0 0.403 -1.392 -1.979
14 HC42 H 2HC4 N N N 0 -1.369 -1.326 -2.125
15 H151 H 1H15 N N N 0 1.948 -0.704 3.024
16 H152 H 2H15 N N N 0 2.535 0.57 1.929
17 H153 H 3H15 N N N 0 1.537 0.998 3.339
18 HO6 H HO6 N N N 0 2.085 0.387 -0.521
19 HC7 H HC7 N N N 0 -2.891 0.365 1.964
20 HC8 H HC8 N N N 0 -0.858 0.604 3.33
21 H13 H H13 N N N 0 -1.15 1.212 -2.659
22 H141 H 1H14 N N N 0 0.775 1.548 -4.034
23 H142 H 2H14 N N N 0 1.479 -0.081 -3.446