Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : M5H

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAA C C1 N Y N 0 3.547 0.922 -0.159
2 CAB C C2 N Y N 0 2.542 1.848 0.128
3 CAC C C3 N Y N 0 3.284 -0.402 -0.287
4 CAD C C4 N Y N 0 1.25 1.469 0.299
5 CAE C C5 N N N 0 -3.864 -0.016 -0.072
6 CAF C C6 N N N 0 -3.234 1.321 -0.518
7 CAK C C7 N N N 0 -1.634 -0.045 0.594
8 CAL C C8 N Y N 0 -0.272 -0.613 0.285
9 CAM C C9 N Y N 0 1.962 -0.869 -0.128
10 CAN C C10 N Y N 0 0.905 0.106 0.186
11 NAG N N1 N N N 0 -2.695 -0.929 0.049
12 NAH N N2 N Y N 0 0.012 -1.903 0.062
13 NAI N N3 N N N 0 -1.82 1.259 -0.091
14 NAJ N N4 N Y N 0 1.382 -2.054 -0.185
15 H1 H H1 N N N 0 4.561 1.271 -0.287
16 H2 H H2 N N N 0 2.799 2.894 0.216
17 H3 H H3 N N N 0 4.082 -1.095 -0.51
18 H4 H H4 N N N 0 0.492 2.206 0.521
19 H5 H H5 N N N 0 -4.364 0.097 0.89
20 H6 H H6 N N N 0 -4.562 -0.382 -0.825
21 H7 H H7 N N N 0 -3.297 1.424 -1.601
22 H8 H H8 N N N 0 -3.74 2.156 -0.031
23 H9 H H9 N N N 0 -1.758 0.073 1.671
24 H10 H H10 N N N 0 -2.431 -1.298 -0.853
25 H12 H H12 N N N 0 -0.634 -2.625 0.074
26 H13 H H13 N N N 0 -1.2 1.343 -0.883