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PDBeChem : Atoms of Molecule
Molecule : MGT
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 53
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
PG |
P |
PG |
N |
N |
N |
0 |
1.209 |
0.371 |
6.774 |
2 |
O1G |
O |
O1G |
N |
N |
N |
0 |
2.161 |
-0.702 |
6.412 |
3 |
O2G |
O |
O2G |
N |
N |
N |
0 |
1.883 |
1.338 |
7.87 |
4 |
O3G |
O |
O3G |
N |
N |
Y |
0 |
-0.129 |
-0.281 |
7.385 |
5 |
O3B |
O |
O3B |
N |
N |
N |
0 |
0.839 |
1.225 |
5.46 |
6 |
PB |
P |
PB |
R |
N |
N |
0 |
0.173 |
0.201 |
4.412 |
7 |
O1B |
O |
O1B |
N |
N |
N |
0 |
1.14 |
-0.87 |
4.086 |
8 |
O2B |
O |
O2B |
N |
N |
N |
0 |
-1.148 |
-0.449 |
5.063 |
9 |
O3A |
O |
O3A |
N |
N |
N |
0 |
-0.224 |
0.992 |
3.067 |
10 |
PA |
P |
PA |
S |
N |
N |
0 |
-0.881 |
-0.087 |
2.069 |
11 |
O1A |
O |
O1A |
N |
N |
N |
0 |
0.102 |
-1.154 |
1.78 |
12 |
O2A |
O |
O2A |
N |
N |
N |
0 |
-2.184 |
-0.732 |
2.759 |
13 |
O5' |
O |
O5* |
N |
N |
N |
0 |
-1.304 |
0.639 |
0.696 |
14 |
C5' |
C |
C5* |
N |
N |
N |
0 |
-1.877 |
-0.365 |
-0.142 |
15 |
C4' |
C |
C4* |
R |
N |
N |
0 |
-2.303 |
0.262 |
-1.471 |
16 |
O4' |
O |
O4* |
N |
N |
N |
0 |
-1.158 |
0.811 |
-2.158 |
17 |
C3' |
C |
C3* |
S |
N |
N |
0 |
-2.856 |
-0.818 |
-2.426 |
18 |
O3' |
O |
O3* |
N |
N |
N |
0 |
-4.284 |
-0.837 |
-2.389 |
19 |
C2' |
C |
C2* |
R |
N |
N |
0 |
-2.355 |
-0.377 |
-3.822 |
20 |
O2' |
O |
O2* |
N |
N |
N |
0 |
-3.459 |
-0.114 |
-4.69 |
21 |
C1' |
C |
C1* |
R |
N |
N |
0 |
-1.557 |
0.914 |
-3.542 |
22 |
N9 |
N |
N9 |
N |
N |
N |
0 |
-0.379 |
0.985 |
-4.409 |
23 |
C8 |
C |
C8 |
N |
N |
N |
0 |
-0.07 |
2.056 |
-5.363 |
24 |
N7 |
N |
N7 |
N |
N |
N |
0 |
1.204 |
1.675 |
-5.986 |
25 |
CM7 |
C |
CM7 |
N |
N |
N |
0 |
1.935 |
2.424 |
-7.012 |
26 |
C5 |
C |
C5 |
N |
N |
N |
0 |
1.586 |
0.445 |
-5.409 |
27 |
C6 |
C |
C6 |
N |
N |
N |
0 |
2.707 |
-0.369 |
-5.626 |
28 |
O6 |
O |
O6 |
N |
N |
N |
0 |
3.558 |
-0.051 |
-6.443 |
29 |
N1 |
N |
N1 |
N |
N |
N |
0 |
2.829 |
-1.51 |
-4.916 |
30 |
C2 |
C |
C2 |
N |
N |
N |
0 |
1.874 |
-1.853 |
-4.009 |
31 |
N2 |
N |
N2 |
N |
N |
N |
0 |
2.014 |
-3.017 |
-3.296 |
32 |
N3 |
N |
N3 |
N |
N |
N |
0 |
0.819 |
-1.097 |
-3.803 |
33 |
C4 |
C |
C4 |
N |
N |
N |
0 |
0.642 |
0.052 |
-4.474 |
34 |
HOG2 |
H |
2HOG |
N |
N |
N |
0 |
2.089 |
0.789 |
8.639 |
35 |
HOG3 |
H |
3HOG |
N |
N |
N |
0 |
-0.72 |
0.45 |
7.607 |
36 |
HOB2 |
H |
2HOB |
N |
N |
N |
0 |
-1.751 |
0.281 |
5.259 |
37 |
HOA2 |
H |
2HOA |
N |
N |
N |
0 |
-2.799 |
-0.005 |
2.931 |
38 |
H5'1 |
H |
1H5* |
N |
N |
N |
0 |
-2.748 |
-0.797 |
0.35 |
39 |
H5'2 |
H |
2H5* |
N |
N |
N |
0 |
-1.14 |
-1.146 |
-0.329 |
40 |
H4' |
H |
H4* |
N |
N |
N |
0 |
-3.051 |
1.037 |
-1.301 |
41 |
H3' |
H |
H3* |
N |
N |
N |
0 |
-2.455 |
-1.798 |
-2.167 |
42 |
HO3' |
H |
*HO3 |
N |
N |
N |
0 |
-4.57 |
-1.528 |
-3.002 |
43 |
H2' |
H |
H2* |
N |
N |
N |
0 |
-1.706 |
-1.14 |
-4.253 |
44 |
HO2' |
H |
*HO2 |
N |
N |
N |
0 |
-3.951 |
-0.942 |
-4.777 |
45 |
H1' |
H |
H1* |
N |
N |
N |
0 |
-2.189 |
1.79 |
-3.69 |
46 |
H81 |
H |
1H8 |
N |
N |
N |
0 |
0.034 |
3.007 |
-4.841 |
47 |
H82 |
H |
2H8 |
N |
N |
N |
0 |
-0.852 |
2.124 |
-6.119 |
48 |
HM71 |
H |
1HM7 |
N |
N |
N |
0 |
2.846 |
1.887 |
-7.273 |
49 |
HM72 |
H |
2HM7 |
N |
N |
N |
0 |
1.309 |
2.531 |
-7.898 |
50 |
HM73 |
H |
3HM7 |
N |
N |
N |
0 |
2.192 |
3.411 |
-6.627 |
51 |
HN1 |
H |
HN1 |
N |
N |
N |
0 |
3.597 |
-2.087 |
-5.052 |
52 |
HN21 |
H |
1HN2 |
N |
N |
N |
0 |
1.34 |
-3.272 |
-2.646 |
53 |
HN22 |
H |
2HN2 |
N |
N |
N |
0 |
2.787 |
-3.585 |
-3.441 |
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