Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MJX

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 52


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -4.93 -0.157 0.482
2 C7 C C1 N N N 0 -6.848 1.121 -0.288
3 O1 O O1 N N N 0 -8.158 1.366 -0.45
4 C8 C C2 N N N 0 -0.179 -1.401 -1.043
5 C9 C C3 N N N 0 1.339 -1.324 -0.863
6 C17 C C4 N Y N 0 3.913 -0.921 -0.599
7 C18 C C5 N N N 0 7.3 0.538 0.1
8 N2 N N2 N N N 0 -0.837 -1.145 0.246
9 N3 N N3 N N N 0 1.701 0.002 -0.345
10 O2 O O2 N N N 0 -6.03 1.897 -0.722
11 C10 C C6 N N N 0 1.044 0.259 0.945
12 C11 C C7 N N N 0 -0.474 0.182 0.764
13 C12 C C8 N Y N 0 3.083 0.135 -0.235
14 C13 C C9 N Y N 0 3.632 1.322 0.239
15 C14 C C10 N Y N 0 4.998 1.456 0.348
16 C3 C C11 N N N 0 -4.366 -0.308 -0.865
17 C4 C C12 N N N 0 -4.456 -1.219 1.378
18 C5 C C13 N N N 0 -2.934 -1.134 1.513
19 C6 C C14 N N N 0 -6.398 -0.121 0.437
20 C1 C C15 N N N 0 -2.295 -1.284 0.13
21 C2 C C16 N N N 0 -2.841 -0.195 -0.797
22 C16 C C17 N Y N 0 5.28 -0.793 -0.492
23 C15 C C18 N Y N 0 5.833 0.398 -0.017
24 N4 N N4 N N N 0 7.815 1.65 0.544
25 N5 N N5 N N N 0 8.123 -0.507 -0.261
26 H2 H H2 N N N 0 -8.398 2.175 -0.922
27 H3 H H3 N N N 0 -0.498 -0.652 -1.769
28 H4 H H4 N N N 0 -0.453 -2.394 -1.4
29 H5 H H5 N N N 0 1.66 -2.09 -0.158
30 H6 H H6 N N N 0 1.827 -1.486 -1.824
31 H7 H H7 N N N 0 3.484 -1.844 -0.962
32 H9 H H9 N N N 0 1.362 -0.49 1.67
33 H10 H H10 N N N 0 1.318 1.251 1.301
34 H11 H H11 N N N 0 -0.796 0.948 0.059
35 H12 H H12 N N N 0 -0.963 0.343 1.725
36 H13 H H13 N N N 0 2.985 2.141 0.52
37 H14 H H14 N N N 0 5.423 2.378 0.715
38 H15 H H15 N N N 0 -4.64 -1.283 -1.267
39 H16 H H16 N N N 0 -4.759 0.475 -1.514
40 H17 H H17 N N N 0 -4.915 -1.098 2.359
41 H18 H H18 N N N 0 -4.73 -2.191 0.966
42 H19 H H19 N N N 0 -2.66 -0.168 1.938
43 H20 H H20 N N N 0 -2.582 -1.932 2.167
44 H21 H H21 N N N 0 -6.767 -1.002 -0.088
45 H22 H H22 N N N 0 -6.792 -0.112 1.453
46 H23 H H23 N N N 0 -2.535 -2.266 -0.278
47 H24 H H24 N N N 0 -2.421 -0.323 -1.795
48 H25 H H25 N N N 0 -2.566 0.785 -0.409
49 H26 H H26 N N N 0 5.923 -1.614 -0.772
50 H27 H H27 N N N 0 8.778 1.742 0.62
51 H28 H H28 N N N 0 7.74 -1.334 -0.591
52 H29 H H29 N N N 0 9.086 -0.415 -0.184