Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MVK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -1.497 -1.602 0.599
2 C2 C C2 N Y N 0 -2.56 -2.381 1.036
3 C14 C C6 N N N 0 -1.499 2.277 0.23
4 C3 C C3 N Y N 0 -3.84 -2.135 0.592
5 C11 C C4 N Y N 0 -3.561 0.683 -1.658
6 C12 C C5 N Y N 0 -4.882 0.451 -1.718
7 C15 C C7 N N N 0 -1.311 3.329 1.326
8 C16 C C8 N N N 0 -0.033 4.124 1.049
9 C17 C C9 N N N 0 1.155 3.16 0.983
10 C18 C C10 S N N 0 0.895 2.112 -0.102
11 C19 C C11 N Y N 0 2.053 1.149 -0.157
12 C20 C C12 N Y N 0 2.829 1.069 -1.299
13 C21 C C13 N Y N 0 3.89 0.19 -1.356
14 C22 C C14 N Y N 0 4.18 -0.621 -0.257
15 C23 C C15 N Y N 0 3.393 -0.535 0.893
16 C24 C C16 N Y N 0 2.338 0.352 0.938
17 C25 C C17 N N N 0 5.315 -1.566 -0.31
18 C4 C C18 N Y N 0 -4.074 -1.094 -0.302
19 C5 C C19 N Y N 0 -2.994 -0.308 -0.741
20 C6 C C20 N Y N 0 -1.704 -0.572 -0.274
21 H3 H H3 N N N 0 -5.584 1.016 -2.313
22 C7 C C21 N N N 0 -4.985 -2.989 1.074
23 C8 C C22 N N N 0 -0.545 0.273 -0.736
24 N9 N N1 N N N 0 -0.338 1.378 0.209
25 C10 C C23 N N N 0 -0.104 -1.89 1.097
26 N13 N N2 N Y N 0 -5.207 -0.607 -0.914
27 O26 O O1 N N N 0 5.998 -1.638 -1.312
28 O27 O O2 N N N 0 5.592 -2.346 0.752
29 H1 H H1 N N N 0 -2.381 -3.189 1.73
30 H2 H H2 N N N 0 -3.02 1.454 -2.187
31 H4 H H4 N N N 0 -2.401 1.699 0.432
32 H5 H H5 N N N 0 -1.594 2.772 -0.736
33 H6 H H6 N N N 0 -2.167 4.005 1.331
34 H7 H H7 N N N 0 -1.231 2.836 2.294
35 H8 H H8 N N N 0 -0.129 4.649 0.098
36 H9 H H9 N N N 0 0.128 4.846 1.85
37 H10 H H10 N N N 0 2.062 3.715 0.744
38 H11 H H11 N N N 0 1.274 2.664 1.946
39 H12 H H12 N N N 0 0.79 2.608 -1.067
40 H13 H H13 N N N 0 2.603 1.696 -2.149
41 H14 H H14 N N N 0 4.495 0.128 -2.249
42 H15 H H15 N N N 0 3.612 -1.16 1.747
43 H16 H H16 N N N 0 1.731 0.423 1.828
44 H17 H H17 N N N 0 -5.409 -2.552 1.977
45 H18 H H18 N N N 0 -5.751 -3.04 0.3
46 H19 H H19 N N N 0 -4.622 -3.993 1.292
47 H20 H H20 N N N 0 0.355 -0.339 -0.782
48 H21 H H21 N N N 0 -0.761 0.676 -1.725
49 H23 H H23 N N N 0 0.375 -2.615 0.438
50 H24 H H24 N N N 0 0.477 -0.968 1.107
51 H25 H H25 N N N 0 -0.157 -2.297 2.107
52 H26 H H26 N N N 0 -6.102 -0.962 -0.794
53 H27 H H27 N N N 0 6.344 -2.949 0.67