Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MVL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 0.212 1.387 0.154
2 N10 N N10 N Y N 0 0.998 0.288 0.239
3 C3 C C3 S N N 0 -1.748 -0.043 0.601
4 C4 C C4 R N N 0 -0.953 -1.116 -0.16
5 C5 C C5 R N N 0 0.507 -1.09 0.306
6 C6 C C6 N N N 0 1.352 -1.981 -0.606
7 C7 C C7 N Y N 0 2.259 2.06 0.166
8 C8 C C8 N Y N 0 2.293 0.714 0.248
9 N1 N N1 N Y N 0 0.973 2.441 0.11
10 O3 O O3 N N N 0 -3.143 -0.205 0.338
11 O2 O O2 N N N 0 -1.76 1.568 -1.209
12 O4 O O4 N N Y 0 -1.517 -2.402 0.105
13 C2 C C2 R N N 0 -1.298 1.344 0.124
14 O6 O O6 N N N 0 2.691 -2.035 -0.112
15 H2 H H2 N N N 0 -1.701 2.11 0.787
16 H5 H H5 N N N 0 0.569 -1.45 1.333
17 H8 H H8 N N N 0 3.176 0.094 0.308
18 H3 H H3 N N N 0 -1.565 -0.145 1.671
19 H4 H H4 N N N 0 -0.999 -0.912 -1.229
20 HA H HA N N N 0 -3.705 0.441 0.787
21 HB H HB N N N 0 -2.442 -2.489 -0.163
22 H6C1 H H6C1 N N N 0 0.931 -2.986 -0.624
23 H6C2 H H6C2 N N N 0 1.353 -1.57 -1.616
24 H6 H H6 N N N 0 3.285 -2.583 -0.642
25 H7 H H7 N N N 0 3.117 2.716 0.149
26 HC H HC N N N 0 -1.494 2.421 -1.58