Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MYX

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 66


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -5.391 2.096 1.136
2 C1 C C1 N N N 0 -6.487 2.534 0.841
3 N1 N N1 N N N 0 -7.042 3.516 1.579
4 C2 C C2 N N N 0 -7.178 2.016 -0.284
5 C3 C C3 N N N 0 -6.583 1.111 -1.08
6 O2 O O2 N N N 0 -7.304 0.456 -2.012
7 C4 C C4 N N N 0 -8.717 0.778 -2.099
8 C5 C C5 R N N 0 -5.11 0.829 -0.931
9 C6 C C6 N N N 0 -4.489 0.62 -2.313
10 C7 C C7 S N N 0 -4.916 -0.432 -0.087
11 O3 O O3 N N N 0 -5.428 -1.563 -0.796
12 C8 C C8 N N N 0 -5.93 -2.6 0.049
13 C9 C C9 N N N 0 -3.447 -0.633 0.185
14 C10 C C10 N N N 0 -3.001 -0.654 1.433
15 C11 C C11 N Y N 0 -1.561 -0.851 1.7
16 C12 C C12 N Y N 0 -1.056 -0.88 2.951
17 N2 N N2 N Y N 0 -0.677 -1.016 0.729
18 C13 C C13 N Y N 0 0.563 -1.181 1.081
19 C14 C C14 N Y N 0 1.696 -1.379 0.153
20 C15 C C15 N Y N 0 1.55 -1.409 -1.19
21 N3 N N3 N Y N 0 2.947 -1.538 0.562
22 C16 C C16 N Y N 0 3.846 -1.702 -0.345
23 C17 C C17 S N N 0 5.315 -1.896 -0.072
24 C18 C C18 N N N 0 5.764 -3.246 -0.637
25 C19 C C19 N N N 0 6.099 -0.79 -0.73
26 C20 C C20 N N N 0 6.853 0.018 0.006
27 C21 C C21 N N N 0 7.619 1.098 -0.636
28 C22 C C22 N N N 0 8.373 1.907 0.101
29 C23 C C23 N N N 0 9.157 3.013 -0.557
30 C24 C C24 N N N 0 8.708 4.362 0.007
31 C25 C C25 N N N 0 10.649 2.815 -0.281
32 S1 S S1 N Y N 0 0.684 -1.133 2.837
33 S2 S S2 N Y N 0 3.141 -1.665 -1.901
34 HN11 H 1HN1 N N N 0 -6.568 3.873 2.346
35 HN12 H 2HN1 N N N 0 -7.916 3.865 1.344
36 H2 H H2 N N N 0 -8.183 2.349 -0.501
37 H41 H 1H4 N N N 0 -9.2 0.557 -1.146
38 H42 H 2H4 N N N 0 -8.835 1.837 -2.329
39 H43 H 3H4 N N N 0 -9.178 0.182 -2.886
40 H5 H H5 N N N 0 -4.627 1.673 -0.439
41 H61 H 1H6 N N N 0 -4.628 1.518 -2.914
42 H62 H 2H6 N N N 0 -3.424 0.416 -2.205
43 H63 H 3H6 N N N 0 -4.973 -0.225 -2.805
44 H7 H H7 N N N 0 -5.449 -0.324 0.857
45 H81 H 1H8 N N N 0 -5.133 -2.955 0.702
46 H82 H 2H8 N N N 0 -6.749 -2.21 0.654
47 H83 H 3H8 N N N 0 -6.292 -3.425 -0.564
48 H9 H H9 N N N 0 -2.758 -0.76 -0.637
49 H10 H H10 N N N 0 -3.69 -0.527 2.255
50 H12 H H12 N N N 0 -1.621 -0.768 3.865
51 H15 H H15 N N N 0 0.622 -1.297 -1.732
52 H17 H H17 N N N 0 5.491 -1.876 1.003
53 H181 H 1H18 N N N 0 5.588 -3.266 -1.712
54 H182 H 2H18 N N N 0 6.827 -3.387 -0.44
55 H183 H 3H18 N N N 0 5.197 -4.046 -0.161
56 H19 H H19 N N N 0 6.048 -0.655 -1.8
57 H20 H H20 N N N 0 6.904 -0.117 1.077
58 H21 H H21 N N N 0 7.568 1.233 -1.706
59 H22 H H22 N N N 0 8.424 1.772 1.171
60 H23 H H23 N N N 0 8.981 2.993 -1.633
61 H241 H 1H24 N N N 0 8.884 4.382 1.083
62 H242 H 2H24 N N N 0 9.275 5.162 -0.468
63 H243 H 3H24 N N N 0 7.645 4.503 -0.19
64 H251 H 1H25 N N N 0 10.968 1.854 -0.683
65 H253 H 3H25 N N N 0 10.824 2.835 0.795
66 H252 H 2H25 N N N 0 11.216 3.615 -0.757