Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : N3D

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 18


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 3.067 -0.232 -0.026
2 C2 C C2 N N N 0 1.818 0.542 -0.025
3 C3 C C3 N N N 0 0.625 -0.415 0.0
4 C4 C C4 N N N 0 -0.675 0.391 0.001
5 N5 N N5 N N N 0 -1.821 -0.527 0.025
6 C6 C C6 N N N 0 -3.09 0.213 0.026
7 HN1 H HN1 N N N 0 3.871 0.378 -0.042
8 HN1A H HN1A N N N 0 3.104 -0.858 0.765
9 H2 H H2 N N N 0 1.789 1.183 0.856
10 H2A H H2A N N N 0 1.772 1.157 -0.924
11 H3 H H3 N N N 0 0.655 -1.056 -0.881
12 H3A H H3A N N N 0 0.671 -1.03 0.899
13 H4 H H4 N N N 0 -0.705 1.033 0.882
14 H4A H H4A N N N 0 -0.722 1.007 -0.898
15 HN5 H HN5 N N N 0 -1.782 -1.175 -0.748
16 H6 H H6 N N N 0 -3.922 -0.491 0.044
17 H6A H H6A N N N 0 -3.136 0.853 0.907
18 H6B H H6B N N N 0 -3.153 0.827 -0.872