Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NBL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 52


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -2.065 2.793 1.785
2 C2 C C2 N N N 0 -1.951 2.993 0.273
3 C3 C C3 N N N 0 -2.044 4.485 -0.053
4 C4 C C4 N N N 0 -0.608 2.448 -0.215
5 C5 C C5 S N N 0 -0.572 0.93 -0.02
6 N6 N N6 N N N 0 0.746 0.419 -0.405
7 C7 C C7 N N N 0 1.744 0.38 0.5
8 O8 O O8 N N N 0 1.528 0.681 1.657
9 O9 O O9 N N N 0 2.981 0.009 0.121
10 C10 C C10 N N N 0 4.057 -0.033 1.095
11 C11 C C11 N Y N 0 5.329 -0.477 0.42
12 C12 C C12 N Y N 0 6.18 0.46 -0.136
13 C13 C C13 N Y N 0 7.347 0.052 -0.755
14 C14 C C14 N Y N 0 7.663 -1.292 -0.818
15 C15 C C15 N Y N 0 6.813 -2.229 -0.261
16 C16 C C16 N Y N 0 5.648 -1.821 0.362
17 C17 C C17 N N N 0 -1.631 0.289 -0.879
18 O18 O O18 N N N 0 -1.331 -0.2 -1.948
19 N19 N N19 N N N 0 -2.911 0.257 -0.459
20 C20 C C20 R N N 0 -3.936 -0.391 -1.282
21 C21 C C21 N N N 0 -5.331 0.176 -0.946
22 C22 C C22 N N N 0 -6.14 -1.036 -0.434
23 N23 N N23 N N N 0 -5.117 -1.99 0.052
24 C24 C C24 N N N 0 -4.022 -1.895 -0.946
25 C25 C C25 N N N 0 -5.168 -2.773 1.157
26 N26 N N26 N N N 0 -5.211 -3.429 2.083
27 H11 H 1H1 N N N 0 -2.971 3.278 2.149
28 H12A H 2H1 N N N 0 -2.108 1.727 2.009
29 H13A H 3H1 N N N 0 -1.196 3.232 2.276
30 H2 H H2 N N N 0 -2.762 2.461 -0.226
31 H31 H 1H3 N N N 0 -1.234 5.017 0.446
32 H32 H 2H3 N N N 0 -1.963 4.628 -1.13
33 H33 H 3H3 N N N 0 -3.001 4.874 0.294
34 H41 H 1H4 N N N 0 -0.483 2.681 -1.272
35 H42 H 2H4 N N N 0 0.2 2.906 0.356
36 H5 H H5 N N N 0 -0.762 0.694 1.028
37 HN6 H HN6 N N N 0 0.899 0.108 -1.311
38 H101 H 1H10 N N N 0 4.2 0.96 1.522
39 H102 H 2H10 N N N 0 3.802 -0.736 1.888
40 H12 H H12 N N N 0 5.933 1.51 -0.087
41 H13 H H13 N N N 0 8.011 0.784 -1.19
42 H14 H H14 N N N 0 8.575 -1.61 -1.303
43 H15 H H15 N N N 0 7.06 -3.279 -0.311
44 H16 H H16 N N N 0 4.984 -2.553 0.797
45 H19 H H19 N N N 0 -3.155 0.663 0.387
46 H20 H H20 N N N 0 -3.715 -0.251 -2.34
47 H211 H 1H21 N N N 0 -5.254 0.936 -0.168
48 H212 H 2H21 N N N 0 -5.796 0.592 -1.839
49 H222 H 2H22 N N N 0 -6.717 -1.478 -1.246
50 H221 H 1H22 N N N 0 -6.798 -0.736 0.382
51 H241 H 1H24 N N N 0 -4.269 -2.472 -1.837
52 H242 H 2H24 N N N 0 -3.084 -2.244 -0.515