Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NEK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 N Y N 0 -4.665 0.509 0.013
2 C02 C C2 N Y N 0 -3.557 1.346 0.018
3 C03 C C3 N Y N 0 -2.287 0.812 0.015
4 C04 C C4 N Y N 0 -2.115 -0.575 0.007
5 C05 C C5 N Y N 0 -3.233 -1.413 0.003
6 C06 C C6 N Y N 0 -4.499 -0.87 0.011
7 C08 C C7 N N N 0 -0.757 -1.152 -0.001
8 C11 C C8 N N N 0 2.625 0.047 0.001
9 C12 C C9 N N N 0 3.981 -0.661 -0.009
10 C13 C C10 N N N 0 5.084 0.366 -0.003
11 N09 N N1 N N N 0 0.276 -0.374 0.003
12 O07 O O1 N N N 0 -5.915 1.04 0.016
13 O10 O O2 N N N 0 1.579 -0.928 -0.005
14 O14 O O3 N N N 0 4.813 1.543 0.009
15 O15 O O4 N N N 0 6.368 -0.027 -0.009
16 H02 H H1 N N N 0 -3.691 2.418 0.024
17 H03 H H2 N N N 0 -1.426 1.463 0.018
18 H05 H H3 N N N 0 -3.104 -2.486 -0.004
19 H06 H H4 N N N 0 -5.363 -1.518 0.007
20 H08 H H5 N N N 0 -0.626 -2.224 -0.011
21 H111 H H6 N N N 0 2.543 0.662 0.896
22 H112 H H7 N N N 0 2.539 0.678 -0.883
23 H121 H H8 N N N 0 4.068 -1.293 0.875
24 H122 H H9 N N N 0 4.064 -1.277 -0.905
25 HO07 H H10 N N N 0 -6.277 1.199 -0.867
26 H1 H H11 N N N 0 7.04 0.668 -0.005