Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NKA

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 90


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAE C C1 R N N 0 -6.046 3.837 1.037
2 CAH C C2 N N N 0 -6.466 2.852 2.14
3 CAG C C3 R N N 0 -5.33 1.796 2.06
4 CAJ C C4 N N N 0 -4.108 2.506 2.677
5 OAI O O1 N N N 0 -3.726 3.566 1.817
6 CAA C C5 R N N 0 -4.706 4.525 1.407
7 OAB O O2 N N N 0 -4.237 4.912 0.073
8 CAC C C6 N N N 0 -4.37 3.708 -0.714
9 CAD C C7 S N N 0 -5.567 2.927 -0.135
10 CAF C C8 S N N 0 -5.07 1.639 0.544
11 OAK O O3 N N N 0 -3.649 1.469 0.301
12 CAL C C9 N N N 0 -3.184 0.206 0.251
13 OAM O O4 N N N 0 -3.946 -0.728 0.407
14 NAN N N1 N N N 0 -1.875 -0.022 0.029
15 CAO C C10 S N N 0 -1.369 -1.396 -0.026
16 CAW C C11 N N N 0 -1.556 -1.953 -1.439
17 CBH C C12 N Y N 0 -3.027 -2.057 -1.747
18 CBI C C13 N Y N 0 -3.716 -3.216 -1.443
19 CBJ C C14 N Y N 0 -5.066 -3.312 -1.726
20 CBK C C15 N Y N 0 -5.727 -2.247 -2.314
21 FBU F F1 N N N 0 -7.046 -2.34 -2.59
22 CBL C C16 N Y N 0 -5.036 -1.087 -2.617
23 CBM C C17 N Y N 0 -3.688 -0.991 -2.329
24 CAT C C18 R N N 0 0.118 -1.407 0.335
25 OBO O O5 N N N 0 0.854 -0.694 -0.66
26 CAP C C19 N N N 0 0.616 -2.852 0.4
27 NAQ N N2 N N N 0 2.0 -2.871 0.879
28 CBP C C20 N N N 0 2.283 -2.722 2.309
29 CBQ C C21 N N N 0 2.231 -4.094 2.984
30 CBS C C22 N N N 0 2.66 -3.959 4.447
31 CBR C C23 N N N 0 0.804 -4.641 2.919
32 SAR S S1 N N N 0 3.246 -3.059 -0.196
33 OAU O O6 N N N 0 4.288 -3.719 0.51
34 OAV O O7 N N N 0 2.671 -3.57 -1.391
35 CAS C C24 N Y N 0 3.849 -1.449 -0.583
36 CAX C C25 N Y N 0 4.767 -0.842 0.25
37 CBB C C26 N Y N 0 3.402 -0.803 -1.725
38 CBA C C27 N Y N 0 3.866 0.456 -2.04
39 CAZ C C28 N Y N 0 4.789 1.082 -1.204
40 NBE N N3 N Y N 0 5.42 2.289 -1.236
41 CAY C C29 N Y N 0 5.243 0.423 -0.051
42 OBC O O8 N Y N 0 6.115 1.263 0.551
43 CBD C C30 N Y N 0 6.2 2.382 -0.19
44 NBF N N4 N N N 0 6.994 3.467 0.107
45 CBG C C31 N N N 0 7.006 4.631 -0.781
46 CBT C C32 N N N 0 7.418 5.873 0.012
47 CBN C C33 N N N 0 8.004 4.397 -1.917
48 H1 H H1 N N N 0 -6.833 4.541 0.768
49 H2 H H2 N N N 0 -6.48 3.338 3.115
50 H3 H H3 N N N 0 -7.434 2.403 1.915
51 H4 H H4 N N N 0 -5.577 0.86 2.562
52 H5 H H5 N N N 0 -4.372 2.905 3.657
53 H6 H H6 N N N 0 -3.284 1.8 2.777
54 H7 H H7 N N N 0 -4.822 5.351 2.108
55 H8 H H8 N N N 0 -4.56 3.964 -1.756
56 H9 H H9 N N N 0 -3.462 3.11 -0.636
57 H10 H H10 N N N 0 -6.347 2.747 -0.876
58 H11 H H11 N N N 0 -5.621 0.78 0.16
59 H12 H H12 N N N 0 -1.267 0.723 -0.095
60 H13 H H13 N N N 0 -1.92 -2.014 0.684
61 H14 H H14 N N N 0 -1.08 -1.286 -2.158
62 H15 H H15 N N N 0 -1.1 -2.941 -1.503
63 H16 H H16 N N N 0 -3.2 -4.046 -0.985
64 H17 H H17 N N N 0 -5.604 -4.218 -1.489
65 H18 H H18 N N N 0 -5.551 -0.256 -3.076
66 H19 H H19 N N N 0 -3.149 -0.084 -2.562
67 H20 H H20 N N N 0 0.26 -0.93 1.304
68 H21 H H21 N N N 0 0.831 -1.103 -1.536
69 H22 H H22 N N N 0 -0.013 -3.423 1.084
70 H23 H H23 N N N 0 0.57 -3.298 -0.594
71 H24 H H24 N N N 0 3.274 -2.289 2.44
72 H25 H H25 N N N 0 1.538 -2.067 2.76
73 H26 H H26 N N N 0 2.907 -4.778 2.469
74 H27 H H27 N N N 0 1.985 -3.275 4.961
75 H28 H H28 N N N 0 2.623 -4.936 4.928
76 H29 H H29 N N N 0 3.677 -3.569 4.493
77 H30 H H30 N N N 0 0.549 -4.868 1.884
78 H31 H H31 N N N 0 0.736 -5.55 3.517
79 H32 H H32 N N N 0 0.111 -3.896 3.31
80 H33 H H33 N N N 0 5.114 -1.353 1.137
81 H34 H H34 N N N 0 2.687 -1.29 -2.372
82 H35 H H35 N N N 0 3.515 0.955 -2.932
83 H36 H H36 N N N 0 7.547 3.459 0.905
84 H37 H H37 N N N 0 6.01 4.78 -1.198
85 H38 H H38 N N N 0 8.414 5.724 0.428
86 H39 H H39 N N N 0 7.427 6.74 -0.65
87 H40 H H40 N N N 0 6.707 6.04 0.821
88 H41 H H41 N N N 0 7.71 3.512 -2.482
89 H42 H H42 N N N 0 8.012 5.264 -2.578
90 H43 H H43 N N N 0 9.0 4.248 -1.5