Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : O55

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -7.128 -0.963 0.544
2 C12 C C2 N N N 0 -2.475 -0.993 -0.267
3 C16 C C3 N N N 0 1.147 -1.835 -0.215
4 C15 C C4 N N N 0 -0.041 -0.871 -0.225
5 C18 C C5 N N N 0 3.564 -1.963 -0.176
6 C19 C C6 N Y N 0 4.828 -1.142 -0.146
7 C05 C C7 N Y N 0 -7.284 0.279 -0.045
8 C06 C C8 N Y N 0 -6.227 0.867 -0.716
9 C07 C C9 N Y N 0 -5.012 0.214 -0.8
10 C08 C C10 N Y N 0 -4.853 -1.033 -0.21
11 C09 C C11 N Y N 0 -5.915 -1.618 0.468
12 C20 C C12 N Y N 0 5.276 -0.601 1.051
13 C22 C C13 N Y N 0 6.44 0.153 1.076
14 C23 C C14 N Y N 0 7.149 0.366 -0.091
15 C25 C C15 N Y N 0 6.7 -0.174 -1.283
16 C26 C C16 N Y N 0 5.543 -0.931 -1.309
17 N01 N N1 N N N 0 -8.797 2.041 1.432
18 N11 N N2 N N N 0 -3.624 -1.697 -0.294
19 N14 N N3 N N N 0 -1.291 -1.636 -0.254
20 N17 N N4 N N N 0 2.399 -1.068 -0.186
21 O03 O O1 N N N 0 -8.874 2.019 -1.035
22 O04 O O2 N N N 0 -9.814 0.111 0.278
23 O13 O O3 N N N 0 -2.506 0.222 -0.255
24 O21 O O4 N N N 0 4.576 -0.811 2.197
25 S02 S S1 N N N 0 -8.832 1.114 0.06
26 BR1 BR BR1 N N N 0 8.736 1.394 -0.058
27 H1 H H1 N N N 0 -7.956 -1.419 1.067
28 H2 H H2 N N N 0 1.09 -2.473 0.667
29 H3 H H3 N N N 0 1.12 -2.453 -1.113
30 H4 H H4 N N N 0 -0.015 -0.253 0.672
31 H5 H H5 N N N 0 0.015 -0.234 -1.107
32 H6 H H6 N N N 0 3.555 -2.582 -1.073
33 H7 H H7 N N N 0 3.525 -2.601 0.707
34 H8 H H8 N N N 0 -6.351 1.836 -1.174
35 H9 H H9 N N N 0 -4.187 0.673 -1.324
36 H10 H H10 N N N 0 -5.794 -2.587 0.928
37 H11 H H11 N N N 0 6.79 0.575 2.006
38 H12 H H12 N N N 0 7.255 -0.007 -2.194
39 H13 H H13 N N N 0 5.194 -1.352 -2.24
40 H14 H H14 N N N 0 -9.302 2.868 1.472
41 H15 H H15 N N N 0 -8.27 1.757 2.196
42 H16 H H16 N N N 0 -3.599 -2.663 -0.372
43 H17 H H17 N N N 0 -1.265 -2.606 -0.264
44 H18 H H18 N N N 0 2.42 -0.439 0.603
45 H20 H H20 N N N 0 4.844 -1.603 2.682