Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : O7J

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O10 O O1 N N N 0 1.678 2.467 3.175
2 C13 C C1 S N N 0 2.629 0.846 -0.736
3 C14 C C2 N N N 0 3.588 -0.271 -1.153
4 C16 C C3 N N N 0 5.317 -1.853 -0.342
5 C02 C C4 N N N 0 -4.101 1.822 -0.64
6 C04 C C5 S N N 0 -3.547 0.45 -0.357
7 C06 C C6 N N N 0 -1.267 0.903 0.319
8 C07 C C7 N N N 0 -0.322 0.968 1.521
9 C08 C C8 S N N 0 1.078 1.364 1.049
10 C09 C C9 N N N 0 1.978 1.548 2.244
11 C15 C C10 N N N 0 4.373 -0.753 0.069
12 C19 C C11 N N N 0 1.946 1.404 -1.958
13 C22 C C12 N N N 0 -4.694 -0.501 -0.009
14 C23 C C13 N Y N 0 -4.155 -1.899 0.153
15 C24 C C14 N Y N 0 -3.618 -2.428 1.269
16 C26 C C15 N Y N 0 -3.561 -3.969 -0.241
17 N05 N N1 N N N 0 -2.611 0.522 0.773
18 N12 N N2 N N N 0 1.621 0.306 0.185
19 N25 N N3 N Y N 0 -3.263 -3.693 0.999
20 N27 N N4 N Y N 0 -4.124 -2.878 -0.804
21 O01 O O2 N N N 0 -4.982 1.998 -1.637
22 O03 O O3 N N N 0 -3.752 2.765 0.031
23 O11 O O4 N N N 0 2.969 0.868 2.364
24 O17 O O5 N N N 0 5.358 -2.215 -1.494
25 O18 O O6 N N N 0 6.112 -2.431 0.572
26 O20 O O7 N N N 0 0.742 1.357 -2.052
27 O21 O O8 N N N 0 2.675 1.953 -2.943
28 H1 H H1 N N N 0 2.285 2.548 3.923
29 H131 H H2 N N N 0 3.189 1.638 -0.239
30 H141 H H3 N N N 0 3.019 -1.102 -1.57
31 H142 H H4 N N N 0 4.281 0.107 -1.905
32 H041 H H5 N N N 0 -3.024 0.08 -1.239
33 H061 H H6 N N N 0 -1.309 1.879 -0.163
34 H062 H H7 N N N 0 -0.9 0.162 -0.391
35 H072 H H8 N N N 0 -0.689 1.709 2.232
36 H071 H H9 N N N 0 -0.281 -0.009 2.004
37 H081 H H10 N N N 0 1.022 2.297 0.489
38 H151 H H11 N N N 0 4.942 0.078 0.485
39 H152 H H12 N N N 0 3.679 -1.131 0.82
40 H222 H H13 N N N 0 -5.161 -0.181 0.922
41 H221 H H14 N N N 0 -5.433 -0.487 -0.81
42 H241 H H15 N N N 0 -3.493 -1.922 2.215
43 H261 H H16 N N N 0 -3.389 -4.914 -0.735
44 H2 H H17 N N N 0 -2.947 1.158 1.48
45 H121 H H19 N N N 0 2.0 -0.45 0.735
46 H271 H H22 N N N 0 -4.443 -2.8 -1.717
47 H5 H H23 N N N 0 -5.309 2.897 -1.78
48 H6 H H24 N N N 0 6.701 -3.132 0.261
49 H7 H H25 N N N 0 2.192 2.297 -3.707