Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : O9V

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 44


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C13 C C1 N N N 0 0.816 -1.752 -0.389
2 C20 C C2 N Y N 0 -3.37 -0.077 0.143
3 C21 C C3 N Y N 0 -4.318 0.266 -0.803
4 C22 C C4 N Y N 0 -4.739 1.578 -0.915
5 C24 C C5 N Y N 0 -3.265 2.203 0.865
6 C01 C C6 N N N 0 0.393 5.283 -0.191
7 C02 C C7 N N N 0 1.786 4.674 -0.028
8 C03 C C8 N N N 0 1.687 3.148 -0.097
9 C05 C C9 N Y N 0 3.077 1.223 0.016
10 C06 C C10 N Y N 0 4.312 0.604 0.163
11 C07 C C11 N Y N 0 4.409 -0.774 0.13
12 C08 C C12 N N N 0 5.753 -1.436 0.291
13 C09 C C13 N Y N 0 3.277 -1.547 -0.048
14 C11 C C14 N Y N 0 2.03 -0.932 -0.197
15 C12 C C15 N Y N 0 1.936 0.461 -0.164
16 C23 C C16 N Y N 0 -4.212 2.546 -0.081
17 C25 C C17 N Y N 0 -2.848 0.891 0.981
18 F10 F F1 N N N 0 3.375 -2.894 -0.08
19 N15 N N1 N N N 0 -0.383 -1.156 -0.538
20 N16 N N2 N N N 0 -1.533 -1.934 -0.725
21 O04 O O1 N N N 0 2.989 2.579 0.054
22 O14 O O2 N N N 0 0.901 -2.965 -0.418
23 O18 O O3 N N N 0 -2.336 -1.9 1.608
24 O19 O O4 N N N 0 -3.875 -2.553 -0.25
25 S17 S S1 N N N 0 -2.832 -1.749 0.285
26 H1 H H1 N N N 0 -4.729 -0.491 -1.455
27 H2 H H2 N N N 0 -5.479 1.846 -1.654
28 H3 H H3 N N N 0 -2.857 2.959 1.52
29 H4 H H4 N N N 0 0.463 6.37 -0.141
30 H5 H H5 N N N 0 -0.022 4.99 -1.155
31 H6 H H6 N N N 0 -0.257 4.925 0.608
32 H7 H H7 N N N 0 2.435 5.032 -0.827
33 H8 H H8 N N N 0 2.201 4.967 0.937
34 H9 H H9 N N N 0 1.038 2.79 0.701
35 H10 H H10 N N N 0 1.272 2.855 -1.062
36 H11 H H11 N N N 0 5.2 1.203 0.303
37 H12 H H12 N N N 0 6.215 -1.563 -0.688
38 H13 H H13 N N N 0 6.393 -0.814 0.916
39 H14 H H14 N N N 0 5.624 -2.411 0.76
40 H15 H H15 N N N 0 0.976 0.942 -0.273
41 H16 H H16 N N N 0 -4.541 3.572 -0.169
42 H17 H H17 N N N 0 -2.107 0.622 1.72
43 H18 H H18 N N N 0 -0.451 -0.189 -0.515
44 H19 H H19 N N N 0 -1.569 -2.581 -1.447