Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : OH4

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 36


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N12 N N1 N Y N 0 -3.044 0.928 1.325
2 C13 C C1 N Y N 0 2.76 -0.125 0.16
3 C15 C C2 N Y N 0 4.124 -1.658 -1.074
4 C17 C C3 N Y N 0 4.299 -1.552 1.312
5 C01 C C4 N N N 0 2.719 2.899 -0.783
6 O02 O O1 N N N 0 1.845 1.783 -0.967
7 C03 C C5 S N N 0 1.709 0.955 0.19
8 C04 C C6 N N N 0 0.319 0.315 0.198
9 C05 C C7 N N N 0 -0.743 1.404 0.353
10 C06 C C8 N Y N 0 -2.112 0.773 0.361
11 N07 N N2 N Y N 0 -2.592 -0.014 -0.563
12 C08 C C9 N Y N 0 -3.836 -0.386 -0.225
13 C09 C C10 N N N 0 -4.737 -1.292 -1.023
14 O10 O O2 N N N 0 -5.98 -1.452 -0.337
15 C11 C C11 N Y N 0 -4.135 0.188 0.956
16 C14 C C12 N Y N 0 3.156 -0.671 -1.046
17 C16 C C13 N Y N 0 4.696 -2.098 0.105
18 C18 C C14 N Y N 0 3.331 -0.565 1.339
19 H1 H H1 N N N 0 -2.956 1.46 2.131
20 H2 H H2 N N N 0 4.434 -2.084 -2.016
21 H3 H H3 N N N 0 4.747 -1.895 2.233
22 H4 H H4 N N N 0 2.768 3.478 -1.705
23 H5 H H5 N N N 0 2.339 3.529 0.021
24 H6 H H6 N N N 0 3.715 2.541 -0.525
25 H7 H H7 N N N 0 1.835 1.56 1.087
26 H8 H H8 N N N 0 0.159 -0.218 -0.74
27 H9 H H9 N N N 0 0.247 -0.385 1.03
28 H10 H H10 N N N 0 -0.584 1.937 1.29
29 H11 H H11 N N N 0 -0.671 2.104 -0.479
30 H13 H H13 N N N 0 -4.917 -0.853 -2.004
31 H14 H H14 N N N 0 -4.26 -2.265 -1.142
32 H15 H H15 N N N 0 -6.611 -2.025 -0.794
33 H16 H H16 N N N 0 -5.061 0.089 1.504
34 H17 H H17 N N N 0 2.709 -0.327 -1.967
35 H18 H H18 N N N 0 5.453 -2.868 0.084
36 H19 H H19 N N N 0 3.022 -0.138 2.282