Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : ORT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 22


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -3.36 0.379 0.341
2 C4 C C4 N N N 0 -0.898 0.576 0.478
3 C5 C C5 N N N 0 -2.151 -0.112 0.002
4 O O O1 N N N 0 3.445 0.032 -0.941
5 C C C1 N N N 0 2.804 -0.288 0.032
6 CA C C2 S N N 0 1.6 0.521 0.44
7 C3 C C3 N N N 0 0.327 -0.178 -0.043
8 N2 N N2 N N N 0 -4.496 -0.246 -0.09
9 N N N4 N N N 0 1.682 1.859 -0.162
10 O3 O O3 N N N 0 -2.072 -1.108 -0.686
11 H1 H H1 N N N 0 -3.423 1.173 0.894
12 H10 H H2 N N N 0 -0.881 1.6 0.103
13 H3 H H3 N N N 0 -0.881 0.588 1.567
14 HA H H5 N N N 0 1.574 0.613 1.526
15 H6 H H6 N N N 0 0.311 -1.201 0.332
16 H7 H H7 N N N 0 0.311 -0.19 -1.133
17 H8 H H8 N N N 0 -5.319 0.231 0.244
18 H9 H H9 N N N 0 -4.506 -0.323 -1.097
19 H H H10 N N N 0 1.707 1.801 -1.169
20 H2 H H11 N N N 0 0.92 2.443 0.148
21 OXT O OXT N N Y 0 3.163 -1.364 0.749
22 HXT H HXT N N Y 0 3.942 -1.852 0.448