Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : OX3

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -0.945 6.406 3.366
2 O1 O O1 N N N 0 -0.605 7.46 4.158
3 C2 C C2 N Y N 0 -2.236 6.311 2.848
4 C3 C C3 N Y N 0 -2.585 5.231 2.037
5 C4 C C4 N Y N 0 -1.637 4.26 1.755
6 C5 C C5 N Y N 0 -0.35 4.341 2.263
7 C6 C C6 N Y N 0 -0.002 5.421 3.074
8 C7 C C7 N N N 0 -2.005 3.12 0.899
9 N8 N N8 N N N 0 -1.166 2.183 0.599
10 O9 O O9 N N N 0 -1.81 1.25 -0.223
11 C10 C C10 N N N 0 -0.922 0.262 -0.538
12 O10 O O10 N N N 0 0.244 0.179 -0.175
13 C11 C C11 N N N 0 -1.596 -0.748 -1.419
14 C12 C C12 N N N 0 -2.277 -1.816 -0.562
15 C13 C C13 N N N 0 -2.897 -2.917 -1.419
16 C14 C C14 N N N 0 -1.875 -3.531 -2.372
17 C15 C C15 N N N 0 -1.2 -2.467 -3.232
18 C16 C C16 N N N 0 -0.576 -1.366 -2.379
19 HO1 H HO1 N N N 0 -1.242 7.555 4.883
20 H2 H H2 N N N 0 -2.975 7.076 3.072
21 H3 H H3 N N N 0 -3.594 5.168 1.638
22 H5 H H5 N N N 0 0.392 3.579 2.041
23 H6 H H6 N N N 0 1.006 5.489 3.474
24 H7 H H7 N N N 0 -3.042 3.096 0.515
25 H11 H H11 N N N 0 -2.356 -0.207 -1.997
26 H121 H 1H12 N N N 0 -3.053 -1.357 0.063
27 H122 H 2H12 N N N 0 -1.55 -2.261 0.13
28 H131 H 1H13 N N N 0 -3.732 -2.502 -1.998
29 H132 H 2H13 N N N 0 -3.314 -3.697 -0.773
30 H141 H 1H14 N N N 0 -1.115 -4.069 -1.794
31 H142 H 2H14 N N N 0 -2.368 -4.268 -3.016
32 H151 H 1H15 N N N 0 -0.428 -2.932 -3.856
33 H152 H 2H15 N N N 0 -1.938 -2.026 -3.913
34 H161 H 1H16 N N N 0 0.268 -1.779 -1.812
35 H162 H 2H16 N N N 0 -0.157 -0.589 -3.031