Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : P1Y

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C01 N Y N 0 -1.534 0.404 0.964
2 C02 C C02 N Y N 0 -2.633 0.014 0.221
3 C03 C C03 N Y N 0 -2.783 -1.317 -0.145
4 C04 C C04 N Y N 0 -1.831 -2.25 0.235
5 C05 C C05 N Y N 0 -0.735 -1.855 0.978
6 C06 C C06 N Y N 0 -0.584 -0.528 1.337
7 C07 C C07 N N N 0 0.613 -0.1 2.147
8 C08 C C08 N Y N 0 1.735 0.286 1.219
9 N09 N N09 N Y N 0 2.587 -0.638 0.834
10 C10 C C10 N Y N 0 3.596 -0.341 0.013
11 C11 C C11 N Y N 0 3.736 0.975 -0.436
12 C12 C C12 N Y N 0 2.801 1.925 0.004
13 N13 N N13 N Y N 0 1.828 1.539 0.815
14 O14 O O14 N N N 0 4.747 1.324 -1.271
15 O15 O O15 N N N 0 2.889 3.216 -0.4
16 C16 C C16 N N N 0 4.551 -1.388 -0.415
17 O17 O O17 N N N 0 4.405 -2.653 0.025
18 O18 O O18 N N N 0 5.466 -1.106 -1.163
19 O20 O O20 N N N 0 -3.862 -1.704 -0.875
20 BR19 BR BR19 N N N 0 -3.929 1.29 -0.294
21 C21 C C21 N N N 0 -3.952 -3.089 -1.216
22 H01 H H01 N N N 0 -1.416 1.439 1.25
23 H04 H H04 N N N 0 -1.946 -3.286 -0.048
24 H05 H H05 N N N 0 0.007 -2.582 1.274
25 H07 H H07 N N N 0 0.344 0.756 2.767
26 H07A H H07A N N N 0 0.934 -0.924 2.784
27 HO17 H HO17 N N N 0 5.054 -3.301 -0.282
28 H21 H H21 N N N 0 -3.082 -3.374 -1.806
29 H21A H H21A N N N 0 -3.985 -3.686 -0.305
30 H21B H H21B N N N 0 -4.858 -3.262 -1.797
31 H10 H H10 N N N 0 4.527 1.243 -2.209
32 H11 H H11 N N N 0 2.403 3.408 -1.213