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PDBeChem : Atoms of Molecule
Molecule : PFD
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 48
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
F29 |
F |
F29 |
N |
N |
N |
0 |
2.709 |
0.298 |
-7.067 |
2 |
C28 |
C |
C28 |
N |
Y |
N |
0 |
1.706 |
0.108 |
-6.183 |
3 |
C26 |
C |
C26 |
N |
Y |
N |
0 |
1.949 |
0.227 |
-4.825 |
4 |
C24 |
C |
C24 |
N |
Y |
N |
0 |
0.924 |
0.034 |
-3.919 |
5 |
C27 |
C |
C27 |
N |
Y |
N |
0 |
0.435 |
-0.206 |
-6.635 |
6 |
C25 |
C |
C25 |
N |
Y |
N |
0 |
-0.59 |
-0.405 |
-5.731 |
7 |
C23 |
C |
C23 |
N |
Y |
N |
0 |
-0.349 |
-0.28 |
-4.371 |
8 |
O22 |
O |
O22 |
N |
N |
N |
0 |
-1.358 |
-0.471 |
-3.481 |
9 |
C20 |
C |
C20 |
N |
Y |
N |
0 |
-0.854 |
-0.192 |
-2.249 |
10 |
C16 |
C |
C16 |
N |
Y |
N |
0 |
-0.227 |
-1.187 |
-1.515 |
11 |
C12 |
C |
C12 |
N |
Y |
N |
0 |
0.284 |
-0.904 |
-0.263 |
12 |
C17 |
C |
C17 |
N |
Y |
N |
0 |
-0.968 |
1.088 |
-1.727 |
13 |
C13 |
C |
C13 |
N |
Y |
N |
0 |
-0.461 |
1.369 |
-0.473 |
14 |
C6 |
C |
C6 |
N |
Y |
N |
0 |
0.17 |
0.375 |
0.258 |
15 |
O2 |
O |
O2 |
N |
N |
N |
0 |
0.674 |
0.655 |
1.49 |
16 |
C1 |
C |
C1 |
N |
N |
N |
0 |
-0.372 |
0.405 |
2.43 |
17 |
C5 |
C |
C5 |
N |
N |
N |
0 |
0.162 |
0.725 |
3.828 |
18 |
C11 |
C |
C11 |
N |
N |
N |
0 |
1.408 |
-0.119 |
4.102 |
19 |
O15 |
O |
O15 |
N |
N |
N |
0 |
1.98 |
0.267 |
5.353 |
20 |
C19 |
C |
C19 |
N |
N |
N |
0 |
3.133 |
-0.551 |
5.552 |
21 |
C21 |
C |
C21 |
N |
N |
N |
0 |
3.796 |
-0.186 |
6.882 |
22 |
C4 |
C |
C4 |
N |
N |
N |
0 |
-1.512 |
1.36 |
2.132 |
23 |
O10 |
O |
O10 |
N |
N |
N |
0 |
-1.341 |
2.561 |
2.148 |
24 |
N9 |
N |
N9 |
N |
N |
N |
0 |
-2.716 |
0.83 |
1.846 |
25 |
C14 |
C |
C14 |
N |
N |
N |
0 |
-2.918 |
-0.491 |
1.825 |
26 |
O18 |
O |
O18 |
N |
N |
N |
0 |
-4.037 |
-0.886 |
1.56 |
27 |
N7 |
N |
N7 |
N |
N |
N |
0 |
-1.98 |
-1.411 |
2.076 |
28 |
C3 |
C |
C3 |
N |
N |
N |
0 |
-0.709 |
-1.072 |
2.38 |
29 |
O8 |
O |
O8 |
N |
N |
N |
0 |
0.13 |
-1.917 |
2.606 |
30 |
H26 |
H |
H26 |
N |
N |
N |
0 |
2.94 |
0.472 |
-4.473 |
31 |
H24 |
H |
H24 |
N |
N |
N |
0 |
1.114 |
0.128 |
-2.86 |
32 |
H27 |
H |
H27 |
N |
N |
N |
0 |
0.247 |
-0.298 |
-7.694 |
33 |
H25 |
H |
H25 |
N |
N |
N |
0 |
-1.58 |
-0.65 |
-6.084 |
34 |
H16 |
H |
H16 |
N |
N |
N |
0 |
-0.138 |
-2.184 |
-1.921 |
35 |
H12 |
H |
H12 |
N |
N |
N |
0 |
0.772 |
-1.679 |
0.308 |
36 |
H17 |
H |
H17 |
N |
N |
N |
0 |
-1.457 |
1.863 |
-2.298 |
37 |
H13 |
H |
H13 |
N |
N |
N |
0 |
-0.55 |
2.366 |
-0.066 |
38 |
H51 |
H |
1H5 |
N |
N |
N |
0 |
-0.602 |
0.496 |
4.57 |
39 |
H52 |
H |
2H5 |
N |
N |
N |
0 |
0.42 |
1.782 |
3.886 |
40 |
H111 |
H |
1H11 |
N |
N |
N |
0 |
2.136 |
0.038 |
3.306 |
41 |
H112 |
H |
2H11 |
N |
N |
N |
0 |
1.132 |
-1.173 |
4.139 |
42 |
H191 |
H |
1H19 |
N |
N |
N |
0 |
3.839 |
-0.389 |
4.737 |
43 |
H192 |
H |
2H19 |
N |
N |
N |
0 |
2.835 |
-1.6 |
5.57 |
44 |
H211 |
H |
1H21 |
N |
N |
N |
0 |
4.676 |
-0.811 |
7.033 |
45 |
H212 |
H |
2H21 |
N |
N |
N |
0 |
4.094 |
0.861 |
6.863 |
46 |
H213 |
H |
3H21 |
N |
N |
N |
0 |
3.09 |
-0.349 |
7.696 |
47 |
HN9 |
H |
HN9 |
N |
N |
N |
0 |
-3.458 |
1.423 |
1.651 |
48 |
HN7 |
H |
HN7 |
N |
N |
N |
0 |
-2.22 |
-2.351 |
2.038 |
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