Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : PNC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -0.848 0.0 -3.829
2 C2 C C2 N Y N 0 -0.543 -1.205 -4.44
3 C3 C C3 N Y N 0 0.085 -1.223 -5.664
4 C4 C C4 N Y N 0 0.418 -0.012 -6.295
5 C5 C C5 N Y N 0 0.105 1.205 -5.666
6 C6 C C6 N Y N 0 -0.529 1.2 -4.444
7 C7 C C7 N N N 0 -1.537 0.007 -2.489
8 C8 C C8 N N N 0 0.115 -0.003 0.964
9 C9 C C9 N N N 0 -0.583 0.003 2.324
10 C10 C C10 N N N 0 0.466 -0.004 3.437
11 C11 C C11 N N N 0 -0.222 0.002 4.778
12 C12 C C12 N N N 0 -0.162 0.004 7.214
13 C13 C C13 N N N 0 0.871 -0.002 8.31
14 C14 C C14 N N N 0 -0.918 0.004 -0.132
15 N1 N N1 N N N 1 1.034 -0.018 -7.491
16 N2 N N2 N N N 0 0.507 -0.002 5.911
17 N3 N N3 N N N 0 -0.531 0.0 -1.423
18 O2 O O2 N N N 0 -2.098 0.014 0.147
19 O4 O O4 N N N 0 1.321 1.033 -8.033
20 O5 O O5 N N N -1 1.304 -1.076 -8.031
21 O6 O O6 N N N 0 -1.434 0.012 4.837
22 O7 O O7 N N N 0 2.047 -0.012 8.031
23 O8 O O8 N N N 0 0.486 0.001 9.596
24 H2 H H2 N N N 0 -0.8 -2.135 -3.953
25 H3 H H3 N N N 0 0.322 -2.164 -6.138
26 H5 H H5 N N N 0 0.357 2.141 -6.142
27 H6 H H6 N N N 0 -0.77 2.134 -3.96
28 H71 H 1H7 N N N 0 -2.167 -0.877 -2.4
29 H72 H 2H7 N N N 0 -2.152 0.902 -2.401
30 H81 H 1H8 N N N 0 0.746 0.881 0.874
31 H82 H 2H8 N N N 0 0.731 -0.898 0.876
32 H102 H 2H10 N N N 0 1.081 -0.899 3.35
33 H91 H 1H9 N N N 0 -1.214 -0.881 2.413
34 H92 H 2H9 N N N 0 -1.199 0.898 2.412
35 H101 H 1H10 N N N 0 1.096 0.88 3.348
36 H121 H 1H12 N N N 0 -0.792 -0.88 7.303
37 H122 H 2H12 N N N 0 -0.778 0.899 7.301
38 HN2 H HN2 N N N 0 1.476 -0.01 5.863
39 HN3 H HN3 N N N 0 0.412 -0.008 -1.647
40 HO8 H HO8 N N N 0 1.15 -0.003 10.299