Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PR1

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 0.728 -0.681 5.624
2 C2 C C2 N Y N 0 -0.517 -0.094 5.666
3 C3 C C3 N Y N 0 -0.894 0.811 4.682
4 C4 C C4 N Y N 0 -0.016 1.129 3.653
5 C5 C C5 N Y N 0 1.233 0.55 3.608
6 C6 C C6 N Y N 0 1.612 -0.364 4.591
7 C10 C C10 N N N 0 2.951 -0.992 4.542
8 N11 N N11 N N N 0 3.775 -0.695 3.578
9 N12 N N12 N N N 0 3.326 -1.891 5.517
10 C13 C C13 N N N 0 -0.429 2.113 2.589
11 O44 O O44 N N N 0 -2.122 1.387 4.727
12 C16 C C16 N Y N 0 0.908 0.958 -4.477
13 C17 C C17 N Y N 0 1.565 1.92 -5.214
14 C18 C C18 N Y N 0 2.906 1.715 -5.505
15 C19 C C19 N Y N 0 3.514 0.558 -5.043
16 N20 N N20 N Y N 0 2.868 -0.339 -4.345
17 C21 C C21 N Y N 0 1.564 -0.207 -4.024
18 C25 C C25 N Y N 0 0.724 -1.113 -3.257
19 C26 C C26 N Y N 0 -0.563 -0.799 -3.05
20 S27 S S27 N Y N 0 -0.747 0.771 -3.872
21 N28 N N28 N N N 0 -1.279 1.438 1.604
22 C29 C C29 N N N 0 -0.815 0.74 0.554
23 C30 C C30 S N N 0 -1.969 0.171 -0.242
24 C31 C C31 N N N 0 -3.182 0.287 0.709
25 C32 C C32 N N N 0 -2.746 1.444 1.635
26 N37 N N37 N N N 0 -1.72 -1.23 -0.586
27 S38 S S38 N N N 0 -1.781 -1.718 -2.168
28 O39 O O39 N N N 0 -1.329 -3.065 -2.174
29 O40 O O40 N N N 0 -3.036 -1.269 -2.662
30 O41 O O41 N N N 0 0.357 0.583 0.287
31 H11 H 1H1 N N N 0 1.02 -1.385 6.388
32 H21 H 1H2 N N N 0 -1.202 -0.339 6.465
33 H51 H 1H5 N N N 0 1.915 0.798 2.808
34 H111 H 1H11 N N N 0 3.511 -0.062 2.892
35 H121 H 1H12 N N N 0 4.204 -2.303 5.485
36 H122 H 2H12 N N N 0 2.714 -2.109 6.237
37 H131 H 1H13 N N N 0 -0.983 2.932 3.047
38 H132 H 2H13 N N N 0 0.458 2.506 2.094
39 H441 H 1H44 N N N 0 -2.032 2.2 5.243
40 H171 H 1H17 N N N 0 1.052 2.807 -5.554
41 H181 H 1H18 N N N 0 3.463 2.441 -6.08
42 H311 H 1H31 N N N 0 -3.324 -0.633 1.274
43 H191 H 1H19 N N N 0 4.558 0.393 -5.267
44 H251 H 1H25 N N N 0 1.133 -2.032 -2.862
45 H301 H 1H30 N N N 0 -2.133 0.761 -1.143
46 H312 H 2H31 N N N 0 -4.086 0.548 0.158
47 H321 H 1H32 N N N 0 -3.103 1.269 2.65
48 H371 H 1H37 N N N 0 -1.519 -1.873 0.111
49 H322 H 2H32 N N N 0 -3.128 2.393 1.259