Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PSP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.245 2.101 -0.104
2 C5A C C5A N Y N 0 4.665 -0.324 -0.391
3 O10 O O10 N N N 0 7.639 -2.368 0.482
4 C3 C C3 N Y N 0 3.053 0.886 0.902
5 N9 N N9 N N N 0 6.486 -1.551 0.579
6 C8 C C8 N N N 0 5.867 -1.177 -0.492
7 C4 C C4 N Y N 0 4.176 0.086 0.855
8 N2 N N2 N Y N 1 2.437 1.256 -0.204
9 C7 C C7 N Y N 0 2.861 0.887 -1.398
10 C6 C C6 N Y N 0 3.979 0.091 -1.538
11 C2 C C2 N N N 0 0.0 1.218 0.0
12 C5 C C5 N N N 0 -1.245 2.101 0.105
13 N8 N N8 N Y N 1 -2.437 1.255 0.205
14 C9 C C9 N Y N 0 -3.056 0.891 -0.902
15 C10 C C10 N Y N 0 -4.179 0.091 -0.855
16 C11 C C11 N Y N 0 -4.664 -0.325 0.391
17 C12 C C12 N Y N 0 -3.978 0.089 1.538
18 N15 N N15 N N N 0 -6.486 -1.551 -0.58
19 C13 C C13 N Y N 0 -2.86 0.886 1.398
20 C14 C C14 N N N 0 -5.866 -1.178 0.491
21 O16 O O16 N N N 0 -7.638 -2.369 -0.484
22 H1A H H1A N N N 0 1.319 2.73 0.783
23 H2A H H2A N N N 0 1.171 2.731 -0.99
24 H10A H AH10 N N N 0 7.943 -2.529 1.386
25 H8 H H8 N N N 0 6.228 -1.488 -1.461
26 H4A H H4A N N N 0 4.675 -0.213 1.765
27 H3A H H3A N N N 0 2.671 1.212 1.859
28 H7A H H7A N N N 0 2.325 1.213 -2.277
29 H6A H H6A N N N 0 4.32 -0.206 -2.519
30 H3 H H3 N N N 0 -0.074 0.589 -0.887
31 H4 H H4 N N N 0 0.075 0.588 0.887
32 H6 H H6 N N N 0 -1.17 2.73 0.992
33 H7 H H7 N N N 0 -1.319 2.73 -0.782
34 H9 H H9 N N N 0 -2.674 1.217 -1.858
35 H10 H H10 N N N 0 -4.679 -0.207 -1.765
36 H12 H H12 N N N 0 -4.319 -0.209 2.519
37 H13 H H13 N N N 0 -2.324 1.21 2.277
38 H14 H H14 N N N 0 -6.227 -1.491 1.46
39 H16 H H16 N N N 0 -7.943 -2.529 -1.388