Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PX5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 3.769 -1.928 -0.01
2 C2 C C2 N Y N 0 2.407 -1.949 -0.022
3 C3 C C3 N Y N 0 1.675 -0.745 -0.012
4 C4 C C4 N Y N 0 2.378 0.464 0.01
5 C5 C C5 N Y N 0 3.771 0.466 0.023
6 C6 C C6 N Y N 0 4.46 -0.725 0.012
7 S7 S S7 N Y N 0 1.204 1.776 0.017
8 C8 C C8 N Y N 0 -0.084 0.657 -0.009
9 N9 N N9 N Y N 0 0.342 -0.549 -0.021
10 C10 C C10 N N N 0 -1.541 1.041 -0.017
11 C11 C C11 N N N 0 -2.177 0.496 -1.257
12 C15 C C15 N N N 0 -2.179 0.535 1.238
13 C12 C C12 N N N 0 -2.966 -0.57 -1.256
14 C13 C C13 N N N 0 -3.255 -1.256 0.017
15 C14 C C14 N N N 0 -2.969 -0.53 1.269
16 H2 H H2 N N N 0 1.885 -2.895 -0.039
17 O16 O O16 N N N 0 -1.64 2.467 -0.038
18 O17 O O17 N N N 0 -3.714 -2.383 0.035
19 H1 H H1 N N N 0 4.317 -2.859 -0.014
20 H5 H H5 N N N 0 4.31 1.402 0.04
21 H6 H H6 N N N 0 5.54 -0.724 0.021
22 H11 H H11 N N N 0 -1.984 0.993 -2.196
23 H12 H H12 N N N 0 -3.395 -0.931 -2.179
24 H14 H H14 N N N 0 -3.399 -0.863 2.202
25 H15 H H15 N N N 0 -1.988 1.061 2.162
26 HO16 H HO16 N N N 0 -2.549 2.798 -0.044