Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : QHY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 58


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N Y N 0 7.148 0.573 1.641
2 C5 C C2 N Y N 0 6.209 1.538 1.955
3 C6 C C3 N Y N 0 4.931 1.459 1.433
4 N1 N N1 N N N 0 0.624 1.207 -0.369
5 C7 C C4 N Y N 0 4.59 0.41 0.592
6 C8 C C5 N N N 0 2.294 0.233 1.133
7 N2 N N2 N Y N 0 -0.833 1.141 -2.21
8 C11 C C8 N N N 0 3.016 1.47 -0.819
9 C9 C C6 N N N 0 0.905 0.065 0.513
10 C10 C C7 N N N 0 1.626 1.303 -1.439
11 C12 C C9 N Y N 0 -0.651 1.127 -0.891
12 N3 N N3 N Y N 0 -3.097 0.971 -1.906
13 C13 C C10 N Y N 0 -2.053 1.064 -2.711
14 C14 C C11 N Y N 0 -2.923 0.955 -0.587
15 C15 C C12 N N N 0 -3.88 -0.288 1.16
16 N4 N N4 N Y N 0 -1.698 1.033 -0.079
17 N N N5 N N N 0 3.297 0.328 0.062
18 C1 C C14 N N N 0 6.23 -2.552 -0.827
19 C C C13 N N N 0 5.676 -3.628 -1.763
20 O O O1 N N N 0 5.208 -1.593 -0.547
21 C16 C C15 N N N 0 -5.03 -0.28 2.169
22 C17 C C16 N N N 0 -6.362 -0.353 1.418
23 C18 C C17 N N N 0 -6.456 0.825 0.444
24 C19 C C18 N N N 0 -5.264 0.785 -0.515
25 C2 C C19 N Y N 0 5.537 -0.562 0.276
26 C20 C C20 N N N 0 -6.437 -1.648 0.651
27 C3 C C21 N Y N 0 6.815 -0.476 0.803
28 N5 N N6 N N N 0 -4.014 0.859 0.253
29 O1 O O2 N N N 0 -7.523 -1.93 -0.086
30 O2 O O3 N N N 0 -5.52 -2.433 0.699
31 H1 H H1 N N N 0 8.147 0.641 2.048
32 H2 H H2 N N N 0 6.475 2.355 2.609
33 H3 H H3 N N N 0 4.2 2.214 1.68
34 H4 H H4 N N N 0 2.317 1.142 1.734
35 H8 H H8 N N N 0 1.604 0.394 -2.04
36 H5 H H5 N N N 0 2.517 -0.627 1.764
37 H6 H H6 N N N 0 0.156 0.024 1.304
38 H7 H H7 N N N 0 0.874 -0.857 -0.067
39 H9 H H9 N N N 0 1.404 2.163 -2.07
40 H10 H H10 N N N 0 3.764 1.512 -1.61
41 H11 H H11 N N N 0 3.046 2.393 -0.24
42 H12 H H12 N N N 0 -2.198 1.077 -3.781
43 H13 H H13 N N N 0 -2.93 -0.222 1.691
44 H14 H H14 N N N 0 -3.909 -1.213 0.584
45 H15 H H15 N N N 0 5.347 -3.166 -2.694
46 H16 H H16 N N N 0 6.456 -4.359 -1.977
47 H17 H H17 N N N 0 4.832 -4.126 -1.286
48 H18 H H18 N N N 0 6.559 -3.014 0.104
49 H19 H H19 N N N 0 7.074 -2.054 -1.304
50 H20 H H20 N N N 0 -4.939 -1.14 2.833
51 H21 H H21 N N N 0 -4.993 0.638 2.756
52 H22 H H22 N N N 0 -7.186 -0.303 2.13
53 H23 H H23 N N N 0 -7.383 0.755 -0.124
54 H24 H H24 N N N 0 -6.442 1.761 1.003
55 H25 H H25 N N N 0 -5.287 -0.145 -1.083
56 H26 H H26 N N N 0 -5.32 1.631 -1.2
57 H27 H H27 N N N 0 7.552 -1.225 0.557
58 H28 H H28 N N N 0 -7.525 -2.773 -0.561