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PDBeChem : Atoms of Molecule
Molecule : QSQ
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 39
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C1' |
C |
C1 |
R |
N |
N |
0 |
-0.14 |
-0.097 |
-0.55 |
2 |
C2 |
C |
C2 |
N |
Y |
N |
0 |
-4.399 |
-1.118 |
-1.533 |
3 |
C2' |
C |
C3 |
R |
N |
N |
0 |
-0.281 |
1.24 |
0.211 |
4 |
C23 |
C |
C4 |
N |
N |
N |
0 |
-1.753 |
3.131 |
0.275 |
5 |
C3' |
C |
C5 |
R |
N |
N |
0 |
1.168 |
1.763 |
0.322 |
6 |
C4 |
C |
C6 |
N |
Y |
N |
0 |
-2.38 |
-1.271 |
-0.445 |
7 |
C4' |
C |
C7 |
R |
N |
N |
0 |
2.014 |
0.68 |
-0.385 |
8 |
C5 |
C |
C8 |
N |
Y |
N |
0 |
-2.894 |
-2.318 |
0.338 |
9 |
C5' |
C |
C9 |
N |
N |
N |
0 |
3.347 |
0.488 |
0.34 |
10 |
C6 |
C |
C10 |
N |
Y |
N |
0 |
-4.221 |
-2.723 |
0.116 |
11 |
C8 |
C |
C11 |
N |
Y |
N |
0 |
-0.845 |
-1.987 |
0.966 |
12 |
F24 |
F |
F1 |
N |
N |
N |
0 |
-2.593 |
2.486 |
1.188 |
13 |
F25 |
F |
F2 |
N |
N |
N |
0 |
-2.512 |
3.973 |
-0.544 |
14 |
F26 |
F |
F3 |
N |
N |
N |
0 |
-0.802 |
3.887 |
0.969 |
15 |
N1 |
N |
N1 |
N |
Y |
N |
0 |
-4.925 |
-2.098 |
-0.822 |
16 |
N3 |
N |
N2 |
N |
Y |
N |
0 |
-3.161 |
-0.705 |
-1.36 |
17 |
N6 |
N |
N3 |
N |
N |
N |
0 |
-4.782 |
-3.749 |
0.856 |
18 |
N7 |
N |
N4 |
N |
Y |
N |
0 |
-1.906 |
-2.71 |
1.178 |
19 |
N9 |
N |
N5 |
N |
Y |
N |
0 |
-1.087 |
-1.085 |
-0.026 |
20 |
O2' |
O |
O1 |
N |
N |
N |
0 |
-1.088 |
2.156 |
-0.532 |
21 |
O3' |
O |
O2 |
N |
N |
N |
0 |
1.301 |
3.018 |
-0.348 |
22 |
O4' |
O |
O3 |
N |
N |
N |
0 |
1.218 |
-0.522 |
-0.302 |
23 |
O5' |
O |
O4 |
N |
N |
N |
0 |
4.16 |
-0.43 |
-0.393 |
24 |
OP1 |
O |
O5 |
N |
N |
N |
0 |
5.325 |
-2.152 |
1.0 |
25 |
OP2 |
O |
O6 |
N |
N |
N |
0 |
6.229 |
-1.545 |
-1.253 |
26 |
P |
P |
P1 |
N |
N |
N |
0 |
5.636 |
-0.867 |
0.081 |
27 |
H1 |
H |
H1 |
N |
N |
N |
0 |
-0.301 |
0.053 |
-1.618 |
28 |
H2 |
H |
H2 |
N |
N |
N |
0 |
-5.005 |
-0.64 |
-2.288 |
29 |
H3 |
H |
H3 |
N |
N |
N |
0 |
-0.704 |
1.072 |
1.201 |
30 |
H4 |
H |
H4 |
N |
N |
N |
0 |
1.462 |
1.855 |
1.368 |
31 |
H5 |
H |
H5 |
N |
N |
N |
0 |
2.185 |
0.953 |
-1.426 |
32 |
H6 |
H |
H6 |
N |
N |
N |
0 |
3.861 |
1.446 |
0.418 |
33 |
H7 |
H |
H7 |
N |
N |
N |
0 |
3.164 |
0.093 |
1.339 |
34 |
H8 |
H |
H8 |
N |
N |
N |
0 |
0.09 |
-2.088 |
1.498 |
35 |
H9 |
H |
H9 |
N |
N |
N |
0 |
-4.257 |
-4.198 |
1.538 |
36 |
H10 |
H |
H10 |
N |
N |
N |
0 |
-5.699 |
-4.02 |
0.694 |
37 |
H11 |
H |
H11 |
N |
N |
N |
0 |
2.191 |
3.393 |
-0.31 |
38 |
H12 |
H |
H12 |
N |
N |
N |
0 |
6.113 |
-2.561 |
1.383 |
39 |
H13 |
H |
H13 |
N |
N |
N |
0 |
7.132 |
-1.877 |
-1.158 |
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