Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RB3

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1M O O1M N N N 0 -1.015 1.593 -6.64
2 C1A C C1A N N N 0 -1.394 1.891 -5.361
3 O1A O O1A N N N 0 -1.789 2.98 -4.967
4 O1B O O1B N N N 0 -3.449 -0.115 -2.469
5 C2A C C2A N N N 0 -1.249 0.649 -4.507
6 C3A C C3A R N N 0 -0.961 0.98 -3.042
7 C4A C C4A N N N 0 0.304 1.818 -2.906
8 O3A O O3A N N N 0 -2.058 1.725 -2.519
9 C1B C C1B N N N 0 -3.272 1.093 -2.547
10 C2B C C2B N N N 0 -4.365 2.132 -2.688
11 C3B C C3B R N N 0 -5.601 1.584 -3.404
12 C4B C C4B N N N 0 -6.66 2.666 -3.577
13 O3B O O3B N N N 0 -5.211 1.12 -4.694
14 C1C C C1C N N N 0 -6.214 0.598 -5.466
15 O1C O O1C N N N 0 -7.389 0.504 -5.139
16 C2C C C2C N N N 0 -5.636 0.158 -6.795
17 C3C C C3C R N N 0 -4.963 1.307 -7.547
18 C4C C C4C N N N 0 -4.439 0.844 -8.901
19 O3C O O3C N N N 0 -5.926 2.337 -7.76
20 C1 C C1 N N N 0 -1.1 2.673 -7.576
21 H2A1 H 1H2A N N N 0 -0.429 0.053 -4.925
22 H2A2 H 2H2A N N N 0 -2.187 0.088 -4.584
23 H3A H H3A N N N 0 -0.861 0.063 -2.45
24 H4A1 H 1H4A N N N 0 0.205 2.767 -3.445
25 H4A2 H 2H4A N N N 0 1.178 1.284 -3.291
26 H4A3 H 3H4A N N N 0 0.486 2.07 -1.856
27 H2B1 H 1H2B N N N 0 -3.95 2.976 -3.25
28 H2B2 H 2H2B N N N 0 -4.636 2.46 -1.678
29 H3B H H3B N N N 0 -6.025 0.738 -2.852
30 H4B1 H 1H4B N N N 0 -6.275 3.499 -4.174
31 H4B2 H 2H4B N N N 0 -6.996 3.052 -2.61
32 H4B3 H 3H4B N N N 0 -7.528 2.269 -4.113
33 H2C1 H 1H2C N N N 0 -6.457 -0.253 -7.394
34 H2C2 H 2H2C N N N 0 -4.903 -0.63 -6.587
35 H1 H H1 N N N 0 -4.141 1.728 -6.958
36 H4C1 H 1H4C N N N 0 -5.254 0.471 -9.53
37 H4C2 H 2H4C N N N 0 -3.69 0.054 -8.789
38 H4C3 H 3H4C N N N 0 -3.982 1.681 -9.441
39 H3C H H3C N N N 0 -5.976 2.473 -8.719
40 H11 H 1H1 N N N 0 -0.696 2.353 -8.539
41 H12 H 2H1 N N N 0 -0.534 3.529 -7.198
42 H13 H 3H1 N N N 0 -2.148 2.956 -7.698