Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RK0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C18 C C1 N Y N 0 -3.643 -1.421 0.736
2 C16 C C2 N Y N 0 -2.61 0.708 1.101
3 C17 C C3 N Y N 0 -3.295 -0.39 1.585
4 C15 C C4 N Y N 0 -2.266 0.782 -0.244
5 C20 C C5 N Y N 0 -3.303 -1.357 -0.617
6 C19 C C6 N N N 0 -4.385 -2.619 1.27
7 C01 C C7 N N N 0 5.185 -3.278 0.471
8 C02 C C8 N N N 0 4.359 -2.086 0.063
9 C05 C C9 N Y N 0 2.543 -0.607 0.437
10 C07 C C10 N Y N 0 1.933 1.13 -0.821
11 C08 C C11 N N N 0 2.062 2.058 -2.001
12 C09 C C12 N Y N 0 0.975 1.26 0.099
13 N06 N N2 N Y N 0 2.758 0.12 -0.614
14 C21 C C13 N N N 0 -3.663 -2.425 -1.5
15 C23 C C14 N Y N 0 -2.611 -0.248 -1.105
16 N04 N N1 N N N 0 3.306 -1.707 0.814
17 N14 N N3 N N N 0 -1.573 1.895 -0.727
18 N22 N N4 N N N 0 -3.949 -3.272 -2.201
19 O03 O O1 N N N 0 4.641 -1.467 -0.941
20 O12 O O2 N N N 0 -0.705 2.618 1.467
21 O13 O O3 N N N 0 0.22 3.588 -0.642
22 S10 S S1 N Y N 0 1.181 -0.022 1.289
23 S11 S S2 N N N 0 -0.281 2.496 0.116
24 H161 H H1 N N N 0 -2.34 1.512 1.77
25 H171 H H2 N N N 0 -3.559 -0.442 2.631
26 H191 H H3 N N N 0 -3.67 -3.372 1.601
27 H192 H H4 N N N 0 -5.009 -2.315 2.11
28 H193 H H5 N N N 0 -5.014 -3.037 0.483
29 H012 H H6 N N N 0 4.782 -3.701 1.391
30 H013 H H7 N N N 0 5.154 -4.029 -0.318
31 H011 H H8 N N N 0 6.216 -2.966 0.636
32 H081 H H9 N N N 0 1.48 1.668 -2.835
33 H083 H H10 N N N 0 1.69 3.046 -1.728
34 H082 H H11 N N N 0 3.11 2.132 -2.292
35 H231 H H12 N N N 0 -2.345 -0.192 -2.151
36 H041 H H13 N N N 0 3.079 -2.202 1.617
37 H141 H H14 N N N 0 -1.848 2.315 -1.557