Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RPQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O3 O O1 N N N 0 2.694 1.169 0.358
2 C3 C C1 R N N 0 1.416 0.578 0.606
3 C4 C C2 S N N 0 1.296 -0.73 -0.181
4 O4 O O2 N N N 0 2.441 -1.546 0.073
5 C2 C C3 S N N 0 0.31 1.541 0.156
6 N2 N N2 N Y N 0 -3.026 0.27 0.139
7 O2 O O3 N N N 0 0.591 2.017 -1.162
8 C1 C C4 N Y N 0 -0.997 0.79 0.158
9 N20 N N1 N Y N 0 -2.208 1.268 0.117
10 N1 N N3 N Y N 0 -2.358 -0.833 0.191
11 N5 N N4 N Y N 0 -1.105 -0.553 0.204
12 C5 C C5 S N N 0 0.031 -1.477 0.255
13 C6 C C6 N N N 0 -0.222 -2.653 -0.69
14 H1 H H1 N N N 0 2.839 2.003 0.826
15 H2 H H2 N N N 0 1.311 0.373 1.672
16 H3 H H3 N N N 0 1.237 -0.509 -1.247
17 H4 H H4 N N N 0 3.28 -1.136 -0.181
18 H5 H H5 N N N 0 0.251 2.383 0.846
19 H6 H H6 N N N 0 -0.071 2.631 -1.508
20 H7 H H7 N N N 0 0.156 -1.845 1.274
21 H8 H H8 N N N 0 0.629 -3.334 -0.659
22 H9 H H9 N N N 0 -1.122 -3.183 -0.378
23 H10 H H10 N N N 0 -0.353 -2.281 -1.706