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PDBeChem : Atoms of Molecule
Molecule : RUS
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 34
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
P |
P |
P |
N |
N |
N |
0 |
4.33 |
0.936 |
0.358 |
2 |
N1 |
N |
N1 |
N |
N |
N |
0 |
-2.284 |
-0.162 |
0.904 |
3 |
C2 |
C |
C2 |
N |
N |
N |
0 |
-2.408 |
0.634 |
-0.174 |
4 |
SE2 |
SE |
SE2 |
N |
N |
N |
0 |
-1.041 |
0.564 |
-1.577 |
5 |
N3 |
N |
N3 |
N |
N |
N |
0 |
-3.417 |
1.452 |
-0.307 |
6 |
C4 |
C |
C4 |
N |
N |
N |
0 |
-4.372 |
1.524 |
0.637 |
7 |
O4 |
O |
O4 |
N |
N |
N |
0 |
-5.313 |
2.291 |
0.506 |
8 |
C5 |
C |
C5 |
N |
N |
N |
0 |
-4.275 |
0.701 |
1.786 |
9 |
C6 |
C |
C6 |
N |
N |
N |
0 |
-3.218 |
-0.136 |
1.896 |
10 |
C1' |
C |
C1* |
R |
N |
N |
0 |
-1.139 |
-1.069 |
1.009 |
11 |
O1P |
O |
O1P |
N |
N |
N |
0 |
4.026 |
1.863 |
-0.754 |
12 |
C2' |
C |
C2* |
R |
N |
N |
0 |
-1.152 |
-2.089 |
-0.152 |
13 |
O2' |
O |
O2* |
N |
N |
N |
0 |
-1.714 |
-3.33 |
0.28 |
14 |
O2P |
O |
O2P |
N |
N |
N |
0 |
5.495 |
-0.079 |
-0.093 |
15 |
C3' |
C |
C3* |
S |
N |
N |
0 |
0.339 |
-2.265 |
-0.513 |
16 |
O3' |
O |
O3* |
N |
N |
N |
0 |
0.745 |
-3.621 |
-0.317 |
17 |
O3P |
O |
O3P |
N |
N |
Y |
0 |
4.818 |
1.778 |
1.641 |
18 |
C4' |
C |
C4* |
R |
N |
N |
0 |
1.078 |
-1.331 |
0.471 |
19 |
O4' |
O |
O4* |
N |
N |
N |
0 |
0.097 |
-0.339 |
0.844 |
20 |
C5' |
C |
C5* |
N |
N |
N |
0 |
2.271 |
-0.667 |
-0.219 |
21 |
O5' |
O |
O5* |
N |
N |
N |
0 |
3.007 |
0.1 |
0.737 |
22 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-5.029 |
0.741 |
2.559 |
23 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-3.115 |
-0.777 |
2.759 |
24 |
H1' |
H |
H1* |
N |
N |
N |
0 |
-1.15 |
-1.584 |
1.969 |
25 |
H2' |
H |
H2* |
N |
N |
N |
0 |
-1.709 |
-1.693 |
-1.001 |
26 |
HO2' |
H |
HO2* |
N |
N |
N |
0 |
-1.746 |
-4.007 |
-0.41 |
27 |
HO2P |
H |
HO2P |
N |
N |
N |
0 |
5.747 |
-0.717 |
0.589 |
28 |
H3' |
H |
H3* |
N |
N |
N |
0 |
0.522 |
-1.956 |
-1.543 |
29 |
HO3' |
H |
HO3* |
N |
N |
N |
0 |
0.269 |
-4.258 |
-0.868 |
30 |
HO3P |
H |
HO3P |
N |
N |
Y |
0 |
5.612 |
2.307 |
1.485 |
31 |
H4' |
H |
H4* |
N |
N |
N |
0 |
1.407 |
-1.888 |
1.348 |
32 |
H5' |
H |
H5* |
N |
N |
N |
0 |
2.918 |
-1.434 |
-0.645 |
33 |
H5'A |
H |
H5*A |
N |
N |
N |
0 |
1.913 |
-0.012 |
-1.013 |
34 |
HSE2 |
H |
HSE2 |
N |
N |
N |
0 |
-1.592 |
1.622 |
-2.583 |
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