Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : SGS

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O5 O O5 N N N 0 -3.142 0.528 0.626
2 C1 C C1 S N N 0 -2.89 -0.508 -0.322
3 O1 O O1 N N N 0 -1.607 -1.083 -0.066
4 C13 C C13 N N N 0 -0.693 -0.117 -0.296
5 O32 O O32 N N N 0 -1.054 0.99 -0.65
6 C21 C C21 N N N 0 0.687 -0.391 -0.124
7 C25 C C25 N N N 0 1.602 0.577 -0.353
8 C26 C C26 N Y N 0 3.032 0.293 -0.175
9 C28 C C28 N Y N 0 5.326 1.023 -0.244
10 C27 C C27 N Y N 0 3.981 1.294 -0.413
11 O5A O O5A N N N 0 6.248 1.995 -0.475
12 C7 C C7 N N N 0 5.527 3.163 -0.872
13 C29 C C29 N Y N 0 5.737 -0.246 0.156
14 O35 O O35 N N N 0 7.061 -0.509 0.32
15 C30 C C30 N Y N 0 4.796 -1.243 0.398
16 O37 O O37 N N N 0 5.202 -2.479 0.794
17 C38 C C38 N N N 0 4.023 -3.27 0.953
18 C31 C C31 N Y N 0 3.45 -0.98 0.232
19 C2 C C2 R N N 0 -3.965 -1.59 -0.203
20 O13 O O13 N N N 0 -3.692 -2.639 -1.135
21 C3 C C3 S N N 0 -5.333 -0.971 -0.514
22 O3 O O3 N N N 0 -6.364 -1.929 -0.264
23 C4 C C4 S N N 0 -5.534 0.25 0.391
24 O4 O O4 N N N 0 -6.735 0.93 0.019
25 C5 C C5 R N N 0 -4.34 1.193 0.229
26 C6 C C6 N N N 0 -4.549 2.43 1.105
27 O6 O O6 N N N 0 -3.498 3.368 0.863
28 H18 H H18 N N N 0 -2.905 -0.09 -1.328
29 H1 H H1 N N N 0 1.007 -1.373 0.191
30 H2 H H2 N N N 0 1.281 1.559 -0.668
31 H3 H H3 N N N 0 3.663 2.277 -0.727
32 H7 H H7 N N N 0 4.846 3.458 -0.073
33 H6 H H6 N N N 0 4.957 2.949 -1.775
34 H5 H H5 N N N 0 6.229 3.974 -1.069
35 H9 H H9 N N N 0 7.389 -0.831 -0.531
36 H10 H H10 N N N 0 3.379 -2.815 1.706
37 H11 H H11 N N N 0 3.49 -3.323 0.004
38 H12 H H12 N N N 0 4.3 -4.275 1.271
39 H4 H H4 N N N 0 2.72 -1.754 0.417
40 H17 H H17 N N N 0 -3.969 -1.993 0.809
41 H22 H H22 N N N 0 -2.825 -2.999 -0.903
42 H16 H H16 N N N 0 -5.366 -0.661 -1.559
43 H20 H H20 N N N 0 -6.198 -2.677 -0.853
44 H15 H H15 N N N 0 -5.605 -0.074 1.43
45 H19 H H19 N N N 0 -7.46 0.301 0.136
46 H31 H H31 N N N 0 -4.258 1.497 -0.814
47 H32 H H32 N N N 0 -5.508 2.889 0.863
48 H33 H H33 N N N 0 -4.54 2.138 2.155
49 H34 H H34 N N N 0 -3.667 4.13 1.433