Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : SV2

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OAE O OAE N N N 0 -2.622 2.929 -1.248
2 PAZ P PAZ N N N 0 -2.89 3.524 0.223
3 OAF O OAF N N N 0 -3.287 5.081 0.108
4 OAC O OAC N N N 0 -3.997 2.779 0.863
5 CAL C CAL N N N 0 -1.381 3.355 1.232
6 OAR O OAR N N N 0 -1.029 1.974 1.334
7 CAJ C CAJ N N N 0 -0.447 1.434 0.146
8 CAX C CAX N N N 0 -0.111 -0.043 0.369
9 CAK C CAK N N N 0 -1.404 -0.833 0.581
10 OAS O OAS N N N 0 -1.086 -2.183 0.925
11 CAM C CAM N N N 0 -2.226 -2.99 1.225
12 PBA P PBA N N N 0 -3.093 -3.415 -0.321
13 OAG O OAG N N N 0 -2.058 -4.1 -1.347
14 OAH O OAH N N N 0 -4.29 -4.444 0.0
15 OAD O OAD N N N 0 -3.649 -2.186 -0.929
16 CAN C CAN N N N 0 0.625 -0.589 -0.857
17 N9 N N9 N Y N 0 1.915 0.092 -0.995
18 C8 C C8 N Y N 0 2.174 1.175 -1.782
19 N7 N N7 N Y N 0 3.424 1.517 -1.654
20 C5 C C5 N Y N 0 4.028 0.676 -0.782
21 C4 C C4 N Y N 0 3.071 -0.237 -0.356
22 N3 N N3 N N N 0 3.433 -1.205 0.545
23 C2 C C2 N N N 0 4.708 -1.273 1.01
24 N2 N N2 N N N 0 5.03 -2.254 1.909
25 N1 N N1 N N N 0 5.646 -0.432 0.628
26 C6 C C6 N N N 0 5.386 0.554 -0.245
27 O6 O O6 N N N 0 6.264 1.331 -0.587
28 H1 H H1 N N N 0 -1.908 3.371 -1.727
29 H2 H H2 N N N 0 -4.083 5.246 -0.416
30 H3 H H3 N N N 0 -0.566 3.904 0.761
31 H4 H H4 N N N 0 -1.563 3.758 2.228
32 H5 H H5 N N N 0 -1.153 1.525 -0.679
33 H6 H H6 N N N 0 0.465 1.981 -0.093
34 H7 H H7 N N N 0 0.524 -0.142 1.249
35 H8 H H8 N N N 0 -1.979 -0.378 1.388
36 H9 H H9 N N N 0 -1.992 -0.821 -0.336
37 H10 H H10 N N N 0 -1.903 -3.904 1.724
38 H11 H H11 N N N 0 -2.9 -2.438 1.88
39 H12 H H12 N N N 0 -1.712 -4.951 -1.046
40 H13 H H13 N N N 0 -4.795 -4.714 -0.779
41 H14 H H14 N N N 0 0.79 -1.659 -0.734
42 H15 H H15 N N N 0 0.024 -0.414 -1.749
43 H16 H H16 N N N 0 1.454 1.672 -2.415
44 H17 H H17 N N N 0 2.774 -1.847 0.853
45 H18 H H18 N N N 0 4.375 -2.929 2.145
46 H19 H H19 N N N 0 5.913 -2.273 2.31