Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : T10

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 62


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -5.099 1.193 4.361
2 C6 C C6 N N N 0 -5.016 1.533 2.975
3 C7 C C7 N N N 0 -4.119 0.549 2.269
4 O8 O O8 N N N 0 -3.604 -0.35 2.889
5 C9 C C9 S N N 0 -3.865 0.688 0.79
6 C10 C C10 N N N 0 -5.099 0.223 0.015
7 C11 C C11 N Y N 0 -4.892 0.476 -1.456
8 C12 C C12 N Y N 0 -4.313 -0.496 -2.25
9 C13 C C13 N Y N 0 -4.124 -0.264 -3.6
10 C14 C C14 N Y N 0 -4.514 0.94 -4.155
11 C15 C C15 N Y N 0 -5.094 1.912 -3.362
12 C16 C C16 N Y N 0 -5.287 1.678 -2.013
13 N17 N N17 N N N 0 -2.713 -0.135 0.414
14 C18 C C18 N N N 0 -1.464 0.355 0.543
15 O19 O O19 N N N 0 -1.293 1.476 0.972
16 C20 C C20 S N N 0 -0.279 -0.492 0.155
17 C24 C C24 N Y N 0 3.126 -3.391 0.656
18 C21 C C21 N N N 0 -0.265 -1.768 1.0
19 C22 C C22 N Y N 0 0.846 -2.67 0.529
20 C23 C C23 N Y N 0 2.106 -2.563 1.088
21 C25 C C25 N Y N 0 2.886 -4.325 -0.334
22 C26 C C26 N Y N 0 1.625 -4.433 -0.891
23 C27 C C27 N Y N 0 0.605 -3.608 -0.457
24 N28 N N28 N N N 0 0.956 0.261 0.388
25 C29 C C29 N N N 0 2.069 -0.036 -0.312
26 O30 O O30 N N N 0 2.048 -0.929 -1.136
27 O31 O O31 N N N 0 3.204 0.656 -0.098
28 C32 C C32 N N N 0 4.403 0.335 -0.852
29 C33 C C33 N Y N 0 5.523 1.248 -0.426
30 C34 C C34 N Y N 0 6.358 0.881 0.613
31 C35 C C35 N Y N 0 7.385 1.718 1.003
32 C36 C C36 N Y N 0 7.579 2.924 0.355
33 C37 C C37 N Y N 0 6.745 3.291 -0.685
34 C38 C C38 N Y N 0 5.72 2.451 -1.078
35 HO1 H HO1 N N N 0 -5.681 1.845 4.774
36 HC61 H 1HC6 N N N 0 -6.012 1.499 2.533
37 HC62 H 2HC6 N N N 0 -4.607 2.538 2.872
38 HC9 H HC9 N N N 0 -3.659 1.732 0.554
39 H101 H 1H10 N N N 0 -5.253 -0.843 0.182
40 H102 H 2H10 N N N 0 -5.974 0.775 0.359
41 H12 H H12 N N N 0 -4.008 -1.436 -1.816
42 H13 H H13 N N N 0 -3.671 -1.023 -4.22
43 H14 H H14 N N N 0 -4.365 1.122 -5.21
44 H15 H H15 N N N 0 -5.399 2.853 -3.796
45 H16 H H16 N N N 0 -5.741 2.438 -1.393
46 H17 H H17 N N N 0 -2.849 -1.032 0.071
47 H20 H H20 N N N 0 -0.35 -0.755 -0.9
48 H211 H 1H21 N N N 0 -0.105 -1.509 2.047
49 H212 H 2H21 N N N 0 -1.22 -2.283 0.895
50 H23 H H23 N N N 0 2.294 -1.833 1.861
51 H24 H H24 N N N 0 4.111 -3.307 1.092
52 H25 H H25 N N N 0 3.682 -4.971 -0.671
53 H26 H H26 N N N 0 1.438 -5.162 -1.665
54 H27 H H27 N N N 0 -0.38 -3.692 -0.893
55 H28 H H28 N N N 0 0.973 0.973 1.046
56 H321 H 1H32 N N N 0 4.686 -0.7 -0.662
57 H322 H 2H32 N N N 0 4.209 0.47 -1.916
58 H34 H H34 N N N 0 6.206 -0.061 1.119
59 H35 H H35 N N N 0 8.037 1.431 1.815
60 H36 H H36 N N N 0 8.382 3.578 0.661
61 H37 H H37 N N N 0 6.896 4.233 -1.191
62 H38 H H38 N N N 0 5.069 2.739 -1.89