Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : T6B

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -1.614 1.491 0.408
2 C2 C C2 N Y N 0 -1.191 2.798 0.507
3 C3 C C3 N Y N 0 0.177 2.803 0.215
4 C4 C C4 N Y N 0 0.536 1.512 -0.049
5 C5 C C5 N Y N 0 1.89 1.052 -0.408
6 C6 C C6 N Y N 0 2.489 -0.039 0.255
7 C7 C C7 N Y N 0 3.783 -0.446 -0.119
8 N1 N N1 N Y N 0 4.426 0.197 -1.084
9 N2 N N2 N N N 0 -3.294 -0.274 0.365
10 C9 C C8 N Y N 0 3.082 -1.796 1.535
11 C8 C C9 N N N 0 5.38 -2.248 0.622
12 O O O1 N N N 0 -3.832 1.769 1.052
13 C C C10 N N N 0 -2.98 1.01 0.629
14 C16 C C11 N N N 0 -4.675 -0.761 0.505
15 C15 C C12 N N N 0 -5.063 -1.495 -0.784
16 O2 O O2 N N N 0 -4.07 -2.479 -1.082
17 C14 C C13 N N N 0 -2.769 -1.941 -1.333
18 C13 C C14 N N N 0 -2.266 -1.23 -0.077
19 O1 O O3 N Y N 0 -0.552 0.731 0.065
20 C12 C C15 N Y N 0 2.622 1.68 -1.42
21 C11 C C16 N Y N 0 3.891 1.219 -1.72
22 C10 C C17 N Y N 0 2.07 -0.937 1.327
23 N N N3 N Y N 0 4.113 -1.516 0.679
24 H1 H H1 N N N 0 -1.798 3.654 0.761
25 H2 H H2 N N N 0 0.827 3.666 0.201
26 H3 H H3 N N N 0 3.083 -2.59 2.268
27 H4 H H4 N N N 0 6.097 -1.788 1.302
28 H5 H H5 N N N 0 5.215 -3.285 0.916
29 H6 H H6 N N N 0 5.772 -2.217 -0.395
30 H7 H H7 N N N 0 -4.739 -1.446 1.351
31 H8 H H8 N N N 0 -5.347 0.082 0.664
32 H9 H H9 N N N 0 -6.029 -1.981 -0.65
33 H10 H H10 N N N 0 -5.126 -0.78 -1.604
34 H11 H H11 N N N 0 -2.086 -2.749 -1.594
35 H12 H H12 N N N 0 -2.823 -1.229 -2.156
36 H13 H H13 N N N 0 -1.341 -0.697 -0.3
37 H14 H H14 N N N 0 -2.086 -1.965 0.707
38 H15 H H15 N N N 0 2.203 2.517 -1.959
39 H16 H H16 N N N 0 4.457 1.708 -2.499
40 H17 H H17 N N N 0 1.127 -0.915 1.853