Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : TGE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 66


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 7.705 0.576 -0.361
2 N1 N N1 N N N 0 6.319 1.062 -0.298
3 O1 O O1 N N N 0 8.473 2.864 -0.267
4 C2 C C2 N N N 0 8.587 1.646 -1.009
5 N2 N N2 N N N 0 -0.519 -1.204 1.121
6 O2 O O2 N N N 0 -8.3 2.258 -0.409
7 C3 C C3 N N N 0 7.137 3.366 -0.186
8 C4 C C4 N N N 0 6.24 2.313 0.47
9 N3 N N3 N N N 0 1.21 0.714 0.059
10 O3 O O3 N N N 0 1.28 -2.397 1.683
11 N4 N N4 N Y N 0 -6.482 1.005 0.287
12 O4 O O4 N N N 0 -0.637 -3.949 0.215
13 C5 C C5 N Y N 0 -0.122 0.906 0.005
14 N5 N N5 N Y N 0 -1.954 2.246 -0.633
15 C6 C C6 N Y N 0 -1.007 -0.054 0.537
16 N6 N N6 N N N 0 3.084 -0.542 0.651
17 C7 C C7 N N N 0 0.819 -1.392 1.174
18 C8 C C8 N N N 0 1.712 -0.365 0.606
19 C9 C C9 N Y N 0 -4.271 1.629 -0.233
20 C10 C C10 N Y N 0 -5.188 0.769 0.366
21 C11 C C11 N Y N 0 -6.959 2.059 -0.357
22 C12 C C12 N Y N 0 -6.107 2.963 -0.979
23 C13 C C13 N Y N 0 -4.742 2.753 -0.922
24 C14 C C14 N Y N 0 -0.654 2.062 -0.582
25 C15 C C15 N Y N 0 -2.816 1.36 -0.141
26 C16 C C16 N Y N 0 -2.375 0.185 0.458
27 C17 C C17 N N N 0 -9.126 1.296 0.249
28 C18 C C18 N N N 0 -1.434 -2.201 1.681
29 C19 C C19 N N N 0 -1.803 -3.218 0.599
30 C20 C C20 N N N 0 -0.873 -4.931 -0.796
31 C21 C C21 N N N 0 0.437 -5.647 -1.128
32 C22 C C22 N N N 0 0.184 -6.699 -2.21
33 C23 C C23 N N N 0 3.973 0.477 0.088
34 C24 C C24 N N N 0 5.428 0.04 0.267
35 H1 H H1 N N N 0 8.064 0.37 0.648
36 H1A H H1A N N N 0 7.744 -0.337 -0.955
37 H2 H H2 N N N 0 9.625 1.314 -1.005
38 H2A H H2A N N N 0 8.261 1.814 -2.035
39 H3 H H3 N N N 0 7.126 4.277 0.412
40 H3A H H3A N N N 0 6.768 3.584 -1.189
41 H4 H H4 N N N 0 5.21 2.668 0.482
42 H4A H H4A N N N 0 6.576 2.135 1.492
43 H10 H H10 N N N 0 -4.835 -0.101 0.9
44 H12 H H12 N N N 0 -6.506 3.819 -1.502
45 H13 H H13 N N N 0 -4.057 3.439 -1.396
46 H14 H H14 N N N 0 0.009 2.808 -0.994
47 H16 H H16 N N N 0 -3.081 -0.529 0.854
48 H17 H H17 N N N 0 -10.173 1.574 0.13
49 H17A H H17A N N N 0 -8.959 0.312 -0.191
50 H17B H H17B N N N 0 -8.875 1.267 1.309
51 H18 H H18 N N N 0 -0.949 -2.714 2.511
52 H18A H H18A N N N 0 -2.338 -1.706 2.037
53 H19 H H19 N N N 0 -2.207 -2.696 -0.268
54 H19A H H19A N N N 0 -2.552 -3.908 0.989
55 H20 H H20 N N N 0 -1.603 -5.656 -0.435
56 H20A H H20A N N N 0 -1.258 -4.444 -1.693
57 H21 H H21 N N N 0 1.167 -4.922 -1.489
58 H21A H H21A N N N 0 0.822 -6.134 -0.231
59 H22 H H22 N N N 0 -0.545 -7.424 -1.849
60 H22A H H22A N N N 0 -0.2 -6.212 -3.106
61 H22B H H22B N N N 0 1.118 -7.209 -2.446
62 HN6 H HN6 N N N 0 3.457 -1.34 1.056
63 H23 H H23 N N N 0 3.758 0.6 -0.974
64 H23A H H23A N N N 0 3.812 1.424 0.603
65 H24 H H24 N N N 0 5.588 -0.907 -0.248
66 H24A H H24A N N N 0 5.642 -0.083 1.328