Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : TL7

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 144


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C35 C C1 N Y N 0 15.093 -3.9 -1.968
2 C33 C C2 N Y N 0 13.979 -4.351 0.097
3 C37 C C3 N N N 0 2.32 -0.712 -0.017
4 C34 C C4 N Y N 0 14.884 -4.722 -0.881
5 C32 C C5 N Y N 0 13.303 -3.154 -0.015
6 C4 C C6 N N N 0 12.161 2.434 -0.65
7 C7 C C7 S N N 0 11.409 0.907 1.094
8 C9 C C8 N N N 0 10.189 0.826 1.976
9 C13 C C9 N Y N 0 6.907 -0.449 1.31
10 C20 C C10 S N N 0 9.589 -1.338 0.973
11 C18 C C11 N Y N 0 7.261 -1.041 0.117
12 C16 C C12 N Y N 0 4.943 -1.161 -0.513
13 C19 C C13 N N N 0 8.691 -1.322 -0.263
14 C1 C C14 N N N 0 10.852 4.347 -1.53
15 C12 C C15 N N N 0 7.928 -0.052 2.347
16 C14 C C16 N Y N 0 5.571 -0.206 1.592
17 C15 C C17 N Y N 0 4.587 -0.559 0.685
18 C17 C C18 N Y N 0 6.272 -1.398 -0.792
19 C2 C C19 S N N 0 12.258 3.813 -1.248
20 C22 C C20 N N N 0 11.036 -1.304 0.552
21 C25 C C21 R N N 0 12.741 -1.031 -1.167
22 C27 C C22 N N N 0 12.752 -0.463 -2.584
23 C28 C C23 N N N 0 14.204 -0.418 -3.076
24 C29 C C24 N N N 0 14.68 -1.851 -3.302
25 C30 C C25 N Y N 0 14.407 -2.698 -2.086
26 C31 C C26 N Y N 0 13.514 -2.323 -1.108
27 C38 C C27 N Y N 0 0.935 -0.369 0.467
28 C39 C C28 N Y N 0 0.762 0.235 1.7
29 C41 C C29 N Y N 0 -1.503 0.259 1.37
30 C42 C C30 N Y N 0 -1.33 -0.339 0.135
31 C44 C C31 N N N 0 -2.888 0.603 1.854
32 C46 C C32 N N N 0 -5.158 0.441 1.133
33 C49 C C33 N N N 0 -5.756 -0.545 -1.026
34 C50 C C34 N N N 0 -6.384 0.256 -2.172
35 C51 C C35 N N N 0 -7.89 0.385 -1.933
36 C52 C C36 R N N 0 -8.139 1.138 -0.624
37 C54 C C37 N N N 0 -7.531 0.348 0.539
38 C56 C C38 N Y N 0 -10.23 2.464 -0.303
39 C57 C C39 N Y N 0 -11.58 2.182 -0.11
40 C58 C C40 N Y N 0 -11.697 0.719 -0.113
41 C60 C C41 N Y N 0 -12.943 -0.065 0.058
42 C61 C C42 N Y N 0 -13.95 0.398 0.905
43 C62 C C43 N Y N 0 -15.108 -0.333 1.061
44 C63 C C44 N Y N 0 -15.273 -1.53 0.375
45 C64 C C45 N Y N 0 -14.273 -1.994 -0.468
46 C65 C C46 N Y N 0 -13.114 -1.264 -0.633
47 C67 C C47 N Y N 0 -17.541 -1.799 -0.086
48 C68 C C48 N Y N 0 -17.478 -0.702 -0.931
49 C69 C C49 N Y N 0 -18.622 -0.25 -1.563
50 C70 C C50 N Y N 0 -19.83 -0.891 -1.352
51 C71 C C51 N Y N 0 -19.896 -1.987 -0.507
52 C72 C C52 N Y N 0 -18.754 -2.443 0.125
53 C75 C C53 N N N 0 -12.666 3.151 0.061
54 C79 C C54 N N N 0 12.66 0.623 1.927
55 C80 C C55 N N N 0 13.743 0.019 1.031
56 C81 C C56 N N N 0 13.173 1.929 2.537
57 C82 C C57 N N N 0 12.316 -0.362 3.046
58 C84 C C58 N N N 0 13.639 5.046 -2.808
59 F73 F F1 N N N 0 -18.818 -3.512 0.948
60 F74 F F2 N N N 0 -20.947 -0.447 -1.969
61 N11 N N1 N N N 0 9.275 -0.144 1.775
62 N24 N N2 N N N 0 11.357 -1.278 -0.757
63 N40 N N3 N Y N 0 -0.453 0.535 2.124
64 N43 N N4 N Y N 0 -0.115 -0.64 -0.289
65 N48 N N5 N N N 0 -6.113 0.094 0.248
66 N55 N N6 N Y N 0 -9.58 1.289 -0.413
67 N59 N N7 N Y N 0 -10.49 0.235 -0.294
68 N6 N N8 N N N 0 11.503 2.248 0.512
69 N77 N N9 N N N 0 -13.333 3.613 -1.015
70 N78 N N10 N N N 0 -9.661 3.72 -0.374
71 N83 N N11 N N N 0 13.018 3.75 -2.503
72 O10 O O1 N N N 0 10.031 1.634 2.866
73 O23 O O2 N N N 0 11.911 -1.299 1.391
74 O36 O O3 N N N 0 3.279 -0.319 0.967
75 O45 O O4 N N N 0 -3.863 0.203 0.854
76 O47 O O5 N N N 0 -5.466 0.968 2.184
77 O5 O O6 N N N 0 12.675 1.491 -1.213
78 O66 O O7 N N N 0 -16.416 -2.248 0.531
79 O76 O O8 N N N 0 -12.965 3.54 1.175
80 H1 H H1 N N N 0 15.799 -4.191 -2.732
81 H2 H H2 N N N 0 13.81 -4.992 0.95
82 H3 H H3 N N N 0 2.391 -1.787 -0.184
83 H4 H H4 N N N 0 2.52 -0.186 -0.95
84 H5 H H5 N N N 0 15.424 -5.654 -0.794
85 H6 H H6 N N N 0 12.597 -2.865 0.749
86 H7 H H7 N N N 0 11.329 0.169 0.295
87 H8 H H8 N N N 0 9.396 -2.237 1.558
88 H9 H H9 N N N 0 4.181 -1.442 -1.226
89 H10 H H10 N N N 0 9.038 -0.55 -0.949
90 H11 H H11 N N N 0 8.746 -2.292 -0.758
91 H12 H H12 N N N 0 10.287 4.394 -0.599
92 H13 H H13 N N N 0 10.922 5.345 -1.963
93 H14 H H14 N N N 0 10.344 3.682 -2.229
94 H15 H H15 N N N 0 7.739 0.972 2.668
95 H16 H H16 N N N 0 7.852 -0.721 3.205
96 H17 H H17 N N N 0 5.297 0.263 2.525
97 H18 H H18 N N N 0 6.547 -1.866 -1.725
98 H19 H H19 N N N 0 12.765 4.478 -0.549
99 H20 H H20 N N N 0 13.195 -0.31 -0.487
100 H21 H H21 N N N 0 12.162 -1.102 -3.241
101 H22 H H22 N N N 0 12.335 0.544 -2.579
102 H23 H H23 N N N 0 14.258 0.139 -4.012
103 H24 H H24 N N N 0 14.831 0.063 -2.326
104 H25 H H25 N N N 0 14.156 -2.273 -4.159
105 H26 H H26 N N N 0 15.752 -1.846 -3.503
106 H27 H H27 N N N 0 1.62 0.46 2.316
107 H28 H H28 N N N 0 -2.188 -0.565 -0.481
108 H29 H H29 N N N 0 -3.088 0.076 2.787
109 H30 H H30 N N N 0 -2.959 1.677 2.02
110 H31 H H31 N N N 0 -6.137 -1.566 -1.042
111 H32 H H32 N N N 0 -4.672 -0.557 -1.138
112 H33 H H33 N N N 0 -5.936 1.249 -2.21
113 H34 H H34 N N N 0 -6.207 -0.26 -3.115
114 H35 H H35 N N N 0 -8.343 0.933 -2.759
115 H36 H H36 N N N 0 -8.334 -0.609 -1.87
116 H37 H H37 N N N 0 -7.674 2.123 -0.678
117 H38 H H38 N N N 0 -7.617 0.926 1.458
118 H39 H H39 N N N 0 -8.057 -0.6 0.65
119 H40 H H40 N N N 0 -13.822 1.329 1.438
120 H41 H H41 N N N 0 -15.888 0.025 1.717
121 H42 H H42 N N N 0 -14.403 -2.925 -0.999
122 H43 H H43 N N N 0 -12.338 -1.623 -1.293
123 H44 H H44 N N N 0 -16.536 -0.2 -1.096
124 H45 H H45 N N N 0 -18.572 0.604 -2.221
125 H46 H H46 N N N 0 -20.84 -2.486 -0.343
126 H47 H H47 N N N 0 14.025 0.741 0.264
127 H48 H H48 N N N 0 14.617 -0.23 1.634
128 H49 H H49 N N N 0 13.36 -0.884 0.556
129 H50 H H50 N N N 0 12.402 2.359 3.176
130 H51 H H51 N N N 0 14.065 1.727 3.131
131 H52 H H52 N N N 0 13.419 2.631 1.74
132 H53 H H53 N N N 0 12.737 -1.34 2.811
133 H54 H H54 N N N 0 12.732 -0.004 3.987
134 H55 H H55 N N N 0 11.233 -0.446 3.136
135 H56 H H56 N N N 0 14.196 4.971 -3.742
136 H57 H H57 N N N 0 12.865 5.806 -2.907
137 H58 H H58 N N N 0 14.318 5.322 -2.001
138 H59 H H59 N N N 0 10.671 -1.422 -1.427
139 H60 H H60 N N N 0 11.092 3.002 0.963
140 H61 H H61 N N N 0 -13.095 3.303 -1.903
141 H62 H H62 N N N 0 -14.052 4.254 -0.902
142 H63 H H63 N N N 0 -8.706 3.812 -0.516
143 H64 H H64 N N N 0 -10.217 4.509 -0.282
144 H65 H H65 N N N 0 12.434 3.441 -3.265