Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : TN1

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 0.045 0.391 0.028
2 C2 C C2 N Y N 0 1.396 0.731 0.044
3 C3 C C3 N Y N 0 2.368 -0.256 0.015
4 C4 C C4 N Y N 0 1.993 -1.584 -0.035
5 C5 C C5 N Y N 0 0.655 -1.92 -0.059
6 C6 C C6 N Y N 0 -0.323 -0.934 -0.031
7 C7 C C7 N N N 0 -1.764 -1.374 -0.067
8 C8 C C8 N N N 0 -2.682 -0.245 0.396
9 C9 C C9 N N N 0 -2.332 1.019 -0.398
10 C10 C C10 N N N 0 -0.961 1.512 0.062
11 O11 O O11 N N N 0 1.763 2.038 0.094
12 HG H HG N N N 0 3.414 0.013 0.032
13 HF H HF N N N 0 2.746 -2.359 -0.056
14 HE H HE N N N 0 0.365 -2.959 -0.1
15 HD1 H HD1 N N N 0 -2.028 -1.657 -1.086
16 HD2 H HD2 N N N 0 -1.893 -2.235 0.589
17 HC1 H HC1 N N N 0 -3.721 -0.518 0.212
18 HC2 H HC2 N N N 0 -2.533 -0.064 1.46
19 HB1 H HB1 N N N 0 -2.301 0.788 -1.462
20 HB2 H HB2 N N N 0 -3.08 1.789 -0.21
21 HA1 H HA1 N N N 0 -0.629 2.316 -0.595
22 HA2 H HA2 N N N 0 -1.038 1.89 1.081
23 HH H HH N N N 0 1.845 2.34 -0.821